Cherax quadricarinatus (Australian red claw crayfish): 138853431
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Entry
138853431 CDS
T09502
Symbol
lt
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04140
Autophagy - animal
cqd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138853431 (lt)
04148 Efferocytosis
138853431 (lt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqd04131
]
138853431 (lt)
Membrane trafficking [BR:
cqd04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
138853431 (lt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_WDHD1_1st
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf-RING_5
Beta-prop_EML_2
WD40
PEP5_VPS11_N
zf_RING_Vps8
WDR55
EIF3I
zf_RING_Vps8_fungal
Beta-prop_HPS5
Beta-prop_WDR19_1st
PHD_NSD
zf-C3H2C3
TPR_GEMI5
zf-RING_11
zf-RING_16
Mcl1_mid
DUF7165
zf-rbx1
TPR_7
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
zf-C3HC4_2
Spore_coat_CotO
VPS11_N
RIX1
TPR_17
WD40_like
Motif
Other DBs
NCBI-GeneID:
138853431
NCBI-ProteinID:
XP_069946103
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All DBs
Position
30:23890631..23980882
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AA seq
873 aa
AA seq
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MESSTVSSSSQEIKDDPQKVDQEEEAEEGEEDSDEEDSEEEEEPKLKYERISGDLREILK
KDGASCISANSKLIIIGTNWGRIHVLDHQGNKVKEFNPHSNPVTMVDMDGNGDYIASCSH
DRKVVVQGLYTAENSHNLVMDSPVRSVALDPLYYKPRSGRRFVVGTNKIILYEKALFGQV
RPTILSESSGPARAMKWAGQFLAWATDSGVRVMDMNTKTVITLIKRDHSLALPCEQYPPH
LCWPDDRTLIVGWGDSVKVCRVKDRVASPSHLTPGLIELPPHYLEIVYMFTTDFYVCGVG
PLDEHLVVLAYNKQTDLSLASLGVDSRRPQMRVLEPLQGTFEEISKDVLGIRCYQEYKPA
NYHLECLVEDRQFYIVCPQDVVVAKPRSADDRIEWLLEHDKYAEALEVVKTSRDVQRYTL
LAVGRVYLDHLMTHGSFQDAAKLCTQILGSDKGLWEEAVVRFNRVRQLRVLSPHLPLGHG
VNLDPAVYQMVLLDLLQTDHQGFLQVVQDWPGHLYNVSFVINAVLETLARNTNNMTLLQA
LAHLYSNIDKHDKALAIYLKLKHKDVFHLIARHNLYGCVAKHVVDLMVLDSSATLEICCK
HVNIVPPDTVVFALSNHQEFLYKYLDALFENRRELSKRYHSQLVTLYADLDRKKLLPLLI
TSSSYDLRAALEVCQARCLNAETIHLLARMGSTMQALQIILVEEQDLQWAIRFCKEHDDV
DLWSRLINYALDKPEFVRELLMNIGTHIDPLLIINQIPKGMEIPGLRDALVKILHDYHLQ
IELRTGCQRILVSDCSNLLNKLVSTQNAAHPVYGDTACAACNKSVLSSSRRELPNIVVFA
CRHVYHQDCMPEDLQQDVCLVCRNDKKRLFSVL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagagctctactgtatcatcttcatcacaagagattaaagatgaccctcagaaagta
gaccaagaagaggaagcagaggaaggagaagaggactcagatgaagaggattctgaagag
gaagaggagccaaaacttaaatatgagaggatctctggggacttacgggagatactaaag
aaagatggagcgtcgtgtatttctgctaactcaaagttaattattattggaacaaactgg
ggccgcattcatgtgttggatcaccagggtaataaggtgaaggagttcaatcctcacagc
aaccctgtgacaatggtagatatggatggaaatggtgactatattgcctcatgctcccat
gatcgcaaggttgttgttcagggtttgtatacagcagaaaactctcataaccttgtaatg
gacagtcctgtgcgaagtgtggctctcgaccctttgtattacaagcctcgatcaggtcgt
cgctttgttgtgggtacaaacaagataattttatatgaaaaagcgttgtttggccaagtg
cgacccacaatcctcagtgagagtagtggtccagcaagagccatgaagtgggcaggacag
tttcttgcatgggccacagattctggtgtgagagtcatggatatgaataccaaaacagtc
atcactctcattaaacgtgatcacagccttgccttgccgtgtgaacagtatcccccacac
ttgtgttggcctgacgaccgcacattgattgtgggatggggggactcggtgaaggtgtgc
cgggtgaaggatcgtgttgccagtccttctcacttgaccccagggctcatagaacttcca
cctcattatcttgagattgtttacatgttcacaacggatttttatgtgtgtggcgttggg
ccgctggatgaacacctggtggtcttagcctacaacaagcaaactgacctctctctggcc
agtctaggggtagattcccgtaggccacagatgcgtgttctggagcctctgcaaggaacg
tttgaagagatctctaaggatgtccttggcataaggtgttaccaagagtataaaccagcc
aactaccatcttgaatgtttggtggaggatcggcaattttatattgtgtgccctcaggat
gtcgttgtagccaagcctcgtagtgctgatgatcgtattgagtggttactggagcatgac
aaatatgctgaagctctagaggtggtgaagacatctagagatgtacagcgctacacactg
ctagctgttggtcgagtgtatttagaccatttaatgactcatggcagtttccaggatgca
gccaaactctgcacacagatacttggttctgacaaggggctgtgggaggaagccgtggtg
aggttcaatcgtgtgcgtcaacttcgcgtgctaagtccacatctgccactcggtcatgga
gtcaatctggacccagctgtatatcaaatggtcttgctggacctcctgcagacagatcat
cagggatttttacaagtggttcaagattggccaggtcatctttacaatgtgtcttttgtt
atcaatgctgtgcttgagaccctggctcgcaacaccaacaatatgacactgcttcaagcc
ctggctcacctctactcaaacattgacaagcatgataaagcacttgctatttatctcaaa
ttaaaacacaaggatgtgttccatctcattgctcgtcacaatctatatggttgtgttgca
aaacatgttgtggacctgatggtcctggactcctctgctacgcttgaaatctgttgcaag
catgtcaacattgtcccaccagacactgtagtttttgctctctctaaccatcaagaattt
ctttacaagtacctggatgccttgtttgaaaatcgacgtgaactgagcaagagataccac
agccaactggtgacactctatgctgatttggacagaaagaaactgctcccacttcttatc
acttcatcttcatatgatcttcgtgctgctcttgaagtttgccaggctcgttgccttaat
gcagagaccattcaccttttagctcgaatgggcagcacaatgcaagctctccagattatt
ttagtagaggaacaagaccttcagtgggccataagattctgcaaggagcatgatgatgtt
gatctctggagccgcctcattaactatgccttggataaaccagaatttgttcgtgagcta
ctcatgaacattggcacccacattgaccccttgctgattattaaccagattcctaagggc
atggagattcctggactaagagatgcactggttaaaattcttcatgattaccatttgcag
attgagctgaggacaggctgccagagaattttggtctcagactgtagtaacctgctgaac
aaactcgtttctacacaaaatgctgctcatcctgtatatggtgacactgcatgtgcagcc
tgcaacaagagtgtcctgagctccagtcgaagagagctgcctaacatagtggtctttgcc
tgtcgccatgtctaccatcaggattgcatgccagaagacttgcaacaggatgtatgctta
gtatgcagaaatgacaagaaaagattattctcagtattatga
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