Cherax quadricarinatus (Australian red claw crayfish): 138854110
Help
Entry
138854110 CDS
T09502
Name
(RefSeq) collagen alpha-1(IX) chain-like isoform X1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
138854110
NCBI-ProteinID:
XP_069951330
LinkDB
All DBs
Position
49:18126421..18305308
Genome browser
AA seq
1013 aa
AA seq
DB search
MRLLSVGARGGGGAVGEAAVVVVVHLVVLQLALFTQLTQAQFDNYDELNGPCADYRPGED
DLQAFDFIRKFRLDVLEQSYPGVKRVRGSNRMQTAYRLKADTNLQIATSDIFPLGLPQEF
SLICTYRARRPPRGPWDIIRINDLENQPQFAVTLNSITRNVEFSIVSYDGTLQILEFEQS
QAAFDSEWHKLHFGVFRDRVALYLDCEKASEVPIDPPGSIDVNGNIHIAKLQDSSRTVPI
ELQWMVMSCDPSSPERESCLELPDHTVVIGEPGKSQVGPDACEVVCPIGPPGFNGTDGED
GAQGPRGLRGPPGAQGSAGPPGENGEPGSIGFPGPVGPPGSQGRQGEPGLRGLPGLQGAQ
GPPGLGGVMGPLGPKGDSGDRGLPGLPGPVGPPGPPGAKGVPGDAVLVTGPAGEQGPQGP
PGLQGIAGLDAAPGAPGPKGEQGNRGERGLNGRRGIAGPKGDTGSPGPPGQRGLPGPTGP
AGVPGIPGGAVDGDTVPGPPGAPGPLGPVGPQGDVGAKGEVGVPGLDGQPGPRGDKGDRG
PEGPPGADGTKGEPGRPGVSGAGGSKGEPGLPGITGLIGKPGVVGLPGPQGPMGPPGPEG
LKGSSGARGEPGFPGEPSAPGTPGPQGPQGMQGERGEEGPPGPSGPPGLQGPPGNPGQIG
IIGPKGHSGIPGLKGEPGKQGPRGEVGPMGGSGTQGPSGPQGPSGRHGKDGPKGSQGIQG
PVGPRGLPGPIGPPGPLGSSGAPGLPGFTGKPGPPGAPGPPGPPGNPAPQALEVAGERVY
GLPGAMGPMGSPGLPGERGADGGRGPEGKRGHPGMPGPSGPAGLPGAPGQRGPPGNDGQA
GAPGREYSESELRSICASVLRENLAEIAKTLQGPPGAPGVGRRGPPGEPGEVGAPGAPGS
PGETGARGYTGYPGAGGPPGPQGERGARGYKGDRGSMGEGRDGKTGPAGEPGPPGPPGVG
LPGRIGERGSPGLPGPQGGRGAPGPQGPPGHCEYCNPALAYQSAAAQGNTKGP
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagactactgtctgtaggtgcaagaggcggcggtggtgcagtgggcgaggcagcggtg
gtggtggtggtgcatctggtggtgctgcaactcgctctctttacacaacttacacaagca
caattcgacaattacgacgaacttaacggaccgtgtgccgactacagacctggcgaggat
gaccttcaagcttttgacttcatccgtaagttccgcctggatgtgttggagcagagttac
cctggggtgaagagggtcagaggctccaaccgcatgcagacagcgtaccgcctcaaggca
gacacaaacctccagatagctaccagtgatatctttcccctgggactacctcaagaattc
tccctcatctgtacgtaccgtgcacgacgacctccacgaggtccctgggacatcatccgc
atcaatgaccttgagaatcaaccacagtttgcagtgaccctcaactctatcacccgcaat
gtggagttctccatagtgtcgtacgacggcacactgcagattctagagtttgagcagtca
caggctgccttcgactctgaatggcacaaacttcacttcggtgtgttccgtgacagagtg
gcactttacctcgactgtgagaaagcttcagaagttcccattgaccctcccggctctatt
gatgtcaatggtaatattcatattgccaaactccaagactcctcccgcacggtgccaata
gagctgcagtggatggtgatgagctgtgatccgtccagccctgaaagagagagttgctta
gagcttcctgaccatactgtagtaattggcgaacccggtaaatcacaagtgggacctgac
gcgtgtgaggttgtgtgtcctattggtcctcctggcttcaacggtactgatggtgaggat
ggggcgcaagggcccagaggtctacgagggccccccggggctcaagggtccgcaggtcca
ccaggagagaatggtgaacccggcagcatcggcttccctggaccagttgggcctccagga
tcacagggacgacaaggtgaacccggcctgaggggtcttcctggtctacaaggggcccaa
ggacccccggggctcggtggtgttatgggtcctcttggacccaaaggtgacagtggtgac
agaggtctgccaggtcttcccggtccagtgggtcccccgggaccgccaggagccaaggga
gtacccggagatgcagtactggtcacaggtccagctggggagcaaggtcctcagggaccc
ccaggtctacaaggaatagcgggactggacgccgccccaggagcaccaggacccaagggt
gaacaaggtaacagaggagaacgaggactcaatggtcggcgaggcattgctggacccaag
ggtgacaccggttcccccggaccacctggacaaagaggtcttccaggacctacgggtcct
gctggggtgcctgggataccaggtggtgctgtggatggtgacaccgtgcctggcccaccc
ggggctcctggacccctggggcctgttggcccacagggggatgtaggtgccaagggtgaa
gtaggtgttcctgggctagacggtcagccaggtcctcgtggagataaaggtgatcgaggc
cctgagggacccccaggggctgatggaactaagggagagcctggcagacctggggtatca
ggtgctggtggtagcaagggagagccggggttaccaggaatcactgggcttattggcaag
cctggtgtagttggcctaccgggtcctcagggccccatgggtcccccagggcctgagggc
cttaaaggttcatcaggagccagaggtgaaccaggctttcccggagagccctctgcgccg
ggtacacccggccctcaaggtcctcagggtatgcaaggagaacgaggtgaggagggccct
ccaggcccctcaggacccccagggcttcagggtccgccaggcaacccgggacaaatagga
atcattggaccgaaaggacattcgggaataccaggattgaagggagagcctggcaagcaa
ggtcctcgaggtgaggttggtcccatgggaggaagtggtactcaaggtccatctggacct
caaggtccaagtggtcgccatggtaaagatggccctaagggatctcagggtatccaggga
cctgttggcccccgtggcctgcctggacctattggaccaccaggaccacttgggtcctct
ggggcacctggtctacccgggttcacaggtaagccaggtcctcctggtgcccctggtcct
ccgggtcccccaggaaaccccgccccccaggccctggaagtggccggggaacgtgtgtat
ggtctccctggggccatggggcccatgggttccccgggcttgccaggtgagcgtggcgct
gatggtggccgtggccctgaaggtaagcgaggtcaccctggtatgccagggccctcaggt
ccagcaggtctaccaggagcccctggtcaacgcggcccacctggtaatgatggtcaagct
ggcgcacctggtcgagaatacagcgagtctgagttacgaagtatttgtgcgtcagtgttg
cgagagaacttggctgagatagccaagacactgcaggggccaccaggtgccccaggtgtt
ggacggcgaggacccccgggtgaaccaggagaagttggtgcaccaggtgctcctgggtca
cctggtgagactggtgcacgtggctacacaggatacccaggtgctggtggacccccaggg
ccacaaggggaacgaggggcccgcggctacaaaggtgacagaggttccatgggtgagggc
agagatggtaaaacaggaccagcaggagaaccagggcctcctggaccaccgggtgtgggt
ctccctggaagaataggtgagcgtgggtccccaggtcttccaggtccccagggtggacgt
ggtgctcctggcccccagggtcccccgggacactgtgaatactgtaacccagccctggct
tatcaatcagctgcagcacaaggcaacactaagggaccgtga
DBGET
integrated database retrieval system
