Curtobacterium flaccumfaciens: GBG65_05400
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Entry
GBG65_05400 CDS
T06246
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GBG65_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqf03021
]
GBG65_05400
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_05400
Enzymes [BR:
cqf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GBG65_05400
Transcription machinery [BR:
cqf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GBG65_05400
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GBG65_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QFS79112
LinkDB
All DBs
Position
complement(1113429..1114424)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEPISEHRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKSLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNDTARFELELTIERGRGYVSATQNRSEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVEAKPAITPRDAIASAGRTLVELFGLARELNTAAEGIEIGPAPVD
AVLSNELQTPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LTELGLSLKDTVPGFDGAHFYSGYDEDESNN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctgaccgaggagccgatctccgagcaccgctcgcgc
ttcgtcatcgagccgctcgagccgggcttcggttacaccctcggcaactcgctgcgccgc
acgctcctctcctcgatccccggcgcggctgtcaccagcatccgcatcgacggcgtcctc
cacgagttcagcaccgttcccggtgtcaaggaagacgtcaccgagatcatcctcaacatc
aagagcctggtcgtctccagcgagcacgacgagcccatcacggcgtacctgcgcaagcag
ggtgccggtcaggtcaccgcagcggacatctccgctccggccggcgtcgagatccacaac
ccggaactcgtcatcgcgaccctgaacgacaccgcgcgcttcgagctcgagctcacgatc
gagcgtggccgtggctacgtctcggcgacgcagaaccgttccgagttcagcgaagccggt
cagatcccgatcgactcgatctactcgcccgtcctgaaggtcacctaccgcgtcgaggcg
acgcgtgccggtgagcgcacggacttcgaccgcctggtcgtcgacgtcgaagcgaagccg
gccatcacgccgcgcgacgccatcgcgtcggccggtcgcacgctggtcgagctgttcggg
ctcgctcgcgagctcaacacggcggcagagggcatcgagatcggccccgcgccggtcgac
gccgtgctctcgaacgaactgcagaccccgatcgaggacctcgacctgtcggtccgcagc
tacaactgcctgaagcgggagggcatcaacacggtgtccgagctcgtcgccctgtcggag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtggacgaggtcaaggacaag
ctcaccgagctcggcctgtccctcaaggacaccgtccccggattcgacggcgcccacttc
tacagcgggtacgacgaggacgagtccaacaactga
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