Curtobacterium flaccumfaciens: GBG65_05555
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Entry
GBG65_05555 CDS
T06246
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cqf
Curtobacterium flaccumfaciens
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqf03032
]
GBG65_05555
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_05555
Enzymes [BR:
cqf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GBG65_05555
DNA replication proteins [BR:
cqf03032
]
Prokaryotic type
DNA Topoisomerases
GBG65_05555
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GBG65_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
QFS79133
LinkDB
All DBs
Position
complement(1131727..1132704)
Genome browser
AA seq
325 aa
AA seq
DB search
MTRLRRSATSGRGYHRVRSGRGFSFRDPDGNTVTDPDERRRLEEFVIPPAWDDVWISPYA
NGHILATGTDGAGRRQYMYHPSWRERMDRIKYDRALALAESLPVARRGVTQDLRRPEPDR
RRALAAAFRMLDQGSLRVGSERYATEHGSRGLSTLLCAHAHVSGDDIELDFPGKSGQEWS
SSIHDHDLARVIAGMKRRGPNARLLSFRERRGAEWEPLSAEDINAYVKERAGDEFTAKDF
RTLHGTVAAAVDLAKTGPQSSQAKRKKAVSHAVKAASDELGNTPTVCRQSYIDPRLLDAY
DHGETIDPNRLGSAEAEVRALLYRQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcctccgcagatccgcgacctccggtcgcggctaccaccgcgtccgatccgga
cgcggtttctcgttccgcgaccccgacggcaacaccgtgaccgatccggacgagcgccgt
cgactcgaggagttcgtgatcccgccggcgtgggacgacgtctggatctccccgtacgcg
aacggccacatcctggccacgggtacggacggtgcggggcgccgccagtacatgtaccac
ccgtcctggcgtgaacggatggaccggatcaagtacgaccgtgcgctggcactggcggag
tccctgccggtcgcccgccgcggcgtcacgcaggacctccgtcgccccgagccggaccgc
cgccgtgcgctggccgcagcgttccgcatgctcgaccaggggtccctccgggtcgggtcc
gagcggtacgccaccgagcacggcagtcgggggctgtcgacgctgctctgcgcgcacgcc
cacgtgtcgggcgacgacatcgaactcgacttccccggcaagagcgggcaggagtggtcg
tcctcgatccacgaccacgacctggcgcgggtcatcgccggcatgaagcgtcgcgggccc
aacgcgcggttgctctcgttccgcgagcgtcgcggtgcggagtgggagccgctctccgcc
gaggacatcaacgcctacgtgaaggaacgcgcgggcgacgagttcaccgcgaaggacttc
cggacactgcacggcacggtcgcggccgcggtcgacctggcgaagaccggaccgcagtcg
tcccaggccaagcggaagaaggccgtctcgcacgcggtgaaggccgccagcgacgagctc
ggcaacaccccgacggtgtgccggcagagctacatcgacccccggttgctcgacgcgtac
gaccacggcgagaccatcgatccgaaccgcctggggtccgccgaggccgaggtccgggca
ctgctctaccgacaatga
DBGET
integrated database retrieval system
