Curtobacterium flaccumfaciens: GBG65_05655
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Entry
GBG65_05655 CDS
T06246
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GBG65_05655 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqf03021
]
GBG65_05655 (rpoC)
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_05655 (rpoC)
Enzymes [BR:
cqf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GBG65_05655 (rpoC)
Transcription machinery [BR:
cqf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GBG65_05655 (rpoC)
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GBG65_05655 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QHN62679
LinkDB
All DBs
Position
complement(1153508..1157389)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLEATSFDAIRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHADMPGLENEMRLEIKTLEGQRDSIIADRLKKLEDD
LAALEEEGAKADVKRRTKDTAEKEMSQVRKSFDEDITRLERVWEDFRNLKVGDLKPEDAV
FHELQDRFGIYFDAYMGAEAIKLRLEAFDLAAEAEALRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLGVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPAQDMIIGLHHLTTVREGAVGEGR
AFSSVAEAILANDQHTLHLNAMAKIRMTGVHFAEGEAPEGYEQGDTVLLETTLGRALFNE
TLPANYPFVQKVTDKGVLSAIVNDLAERYSKTETAAALDRIKDAGFYWGTRSGVTVALSD
VVTPPRKKEIIAGYEIQAAKVQGEFDKGLITDSERRADLIKIWTEATNEIAQEMRDNFPV
DNTINRMVSSGARGNWLQVRNIAGMRGLVNNPKGEIIARPIINSYREGLTVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTRGLELPIATVDADGKLVRDPR
VENTVYSRTLATEAVDAQGTVVAEAREDVGDVLLEKLLAAGVESIKVRSVLTCESAVGVC
AKCYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTE
LFEARTPKGASPIAEAPGRVVVEDTDKGRRIILTPDNGDEPFIYPVLKRATLLIEDNQHV
ELGEQFIAGTVDPKEVLRVKGVREVQKHLVNGVQDVYGSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRSRYNALNRAALQEGRKTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKQDHLVGLKENVIIGKLIPAGTGLSRYRDVDVNATEEAKAERYPN
RIFADDSSFSDADLSFVDFDSFSSDDFTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcaacttcctttgacgccattcggatcggcctcgcgaccgccgaggacatc
cgtcagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggtccttcccgcgactgggagtgc
gcctgcggcaagtacaagcgtgtccggttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgccgtgagcgcatgggccacatcgagctcgctgccccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcgggtacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcatcgacatcgat
gaagagggccgtcacgcggacatgccgggtctcgagaacgagatgcgtctcgagatcaag
accctcgagggccagcgcgactcgatcatcgccgaccgcctcaagaagctcgaggacgac
ctcgcagcccttgaggaagagggtgcgaaggccgacgtcaagcgccgcaccaaggacacc
gccgagaaggagatgtcccaggtccgcaagtcgttcgacgaggacatcacccgtctcgag
cgtgtgtgggaggacttccgcaacctcaaggtgggcgacctcaagcccgaggatgccgtc
ttccacgagctccaggaccggttcgggatctacttcgacgcctacatgggcgccgaggcg
atcaagctccggctcgaggcgttcgacctggccgccgaggccgaggcgctgcgtctgcag
atcgccgagggcaagggccagaagaagatccgcgcgatcaagcgtctgcgcgtcgtcagc
tccttcctcgccaccggcaactcgccggccgcgatggtgctcggcgtcgtgccggtcatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgtttcgccacgtcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctccgccgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaagccgttgacgcg
ctgttcgacaacggtcgtcgtggacgtccggtcacgggtaccggcaaccgtgccctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctcttcaagccgttcgtgatcaagcgcctg
atcgacctgtcgcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
ccgcaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctgaaccgt
gcgccgacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgtgctgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtccgacggccgcccggtgaccctgcccgcacaggac
atgatcatcggtctgcaccacctgacgaccgtccgcgagggcgccgtcggtgaaggccgt
gcgttctcctcggtcgccgaggcgatcctggccaacgaccagcacacgctgcacctcaac
gcgatggcgaagatccgcatgacgggtgtccacttcgccgagggtgaagctcccgagggc
tacgagcagggcgacaccgtgctgctcgagacgacgctgggccgtgcgctcttcaacgag
accctgccggcgaactacccgttcgtccagaaggtcaccgacaagggcgtgctctccgcg
atcgtcaacgacctcgccgagcgctactccaagaccgagacggccgctgcgctggaccgg
atcaaggacgccggcttctactggggcacccgctccggtgtgaccgtcgccctgtcggac
gtcgtgacgcctcctcgcaagaaggagatcatcgcgggctacgagatccaggccgccaag
gtgcagggcgagttcgacaagggtctgatcaccgactccgagcgtcgcgccgacctgatc
aagatctggaccgaggccacgaacgagatcgcgcaggagatgcgcgacaacttcccggtc
gacaacaccatcaaccgcatggtgtcgtccggtgctcgtggtaactggctccaggtccgc
aacatcgccggtatgcgtggtctggtgaacaacccgaagggcgagatcatcgcccgcccg
atcatcaactcgtaccgcgagggcctgaccgtggcggagtacttcatcgccacccacggt
gctcggaagggtcttgccgacaccgcgctccgtaccgcggactccgggtacctcacccgt
cgtctcgtggacgtctcgcaggacgtcatcatccgcgaggacgactgcggcacgacgcgt
ggcctcgagctgccgatcgcgaccgtggacgccgacggcaagctcgtccgcgacccgcgc
gtcgagaacaccgtgtactcccgcaccctggccaccgaggccgtggacgcacagggcacg
gtcgtggcagaggctcgcgaggacgtcggtgacgtgctcctcgagaagctgctggcagcc
ggtgtcgagagcatcaaggtgcgctcggtcctgacctgcgagtcggccgtcggtgtctgc
gcgaagtgctacggccgttcgctcgccaccggcaacctggtcgacatcggtgaggcagtc
ggcatcatcgccgcgcagtccatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggtggttcggcctcggccgacgacatcacccagggtctgccgcgtgtcacggag
ctcttcgaggcgcgtacccccaagggcgcgtccccgatcgccgaggcccccggccgcgtc
gtggtcgaggacacggacaagggtcgtcggatcatcctcacgccggacaacggcgacgag
ccgttcatctacccggtgctcaagcgtgcgacgctcctcatcgaggacaaccagcacgtc
gagctcggcgagcagttcatcgccggcaccgtcgacccgaaggaagtcctccgggtcaag
ggtgtccgagaggtccagaagcacctggtcaacggtgtgcaggacgtctacggctcgcag
ggtgtgccgatccacgacaagcacatcgaggtcatcgtccgccagatgctccgcaaggtc
accgtcgtcgaccacggcgacaccgacctgctgccgggtgagctcgtcgaccggtcgcgc
tacaacgcgctgaaccgtgcggcgctgcaggagggtcgcaagaccgcctcggctcgccag
gaggtcatgggcatcacgaaggcgtccctcgcgaccgagtcgtggctgtccgccgcttcc
ttccaggagaccacccgcgtgctcacgcaggcggccatggagggcaagcaggaccacctc
gtcggcctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggcctcagc
cggtaccgtgacgtggacgtgaacgcgaccgaagaggcgaaggcggagcggtaccccaac
cgcatcttcgctgacgactcgtcgttctcggacgccgacctgagcttcgtcgacttcgac
agcttctcgtcggacgacttcacgccgggcacgtacaactga
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integrated database retrieval system
