Curtobacterium flaccumfaciens: GBG65_10385
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Entry
GBG65_10385 CDS
T06246
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBG65_10385 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqf03019
]
GBG65_10385 (recQ)
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_10385 (recQ)
Enzymes [BR:
cqf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBG65_10385 (recQ)
Messenger RNA biogenesis [BR:
cqf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBG65_10385 (recQ)
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GBG65_10385 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
QFS79740
LinkDB
All DBs
Position
2087792..2089660
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AA seq
622 aa
AA seq
DB search
MSTTPASAAVPAPAAVSAPRAAALDVLHRVWGYDDFRGEQAAIIDQVVAGGDALVLMPTG
GGKSLCYQVPSLVRDGVGVVVSPLIALMQDQVDALAANGVRAAFLNSTQGPDERSRVERA
VVQGEVDMLYLAPERLRLESTRALLDRARVSLFAIDEAHCVAQWGHDFRPDYLELSVLHE
RWPTVPRIALTATATPQTHREISARLGLDDAAHFVADFDRPNIQYRIEPKTGALQQLLTF
IRTEHSGDAGIVYCLSRNSVERTASALAEQGINALPYHAGLDARVRARNQSTFLREDGVV
MVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPATAWLAYGLNDVVQQR
RMIDQSEGDAAHRRQLSAHLDAMLSLCETIECRRVRLLAYFGQESTACGNCDTCIAPPES
WDGTVPAQKLLSTVVRLERERRQRYGVSHLVDILIGKRSPRVQELQHDTLATFGIGADLS
EGEWRAVARQVLAQGYAAVSGDGFGTVVLSPTSAEVLTGKVQVRMRRDPVKAPRAGRSSR
RTVVTDMPQEAVGLFEALRAWRAAEAREQGVPAYVVFNDATLRGISAVRPADVDQLGEIS
GVGAAKLERYGRAVLDVVAAAD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacgcccgcgtccgctgccgtgcctgcgcccgctgccgtgtccgcaccccgt
gccgctgcgctcgacgtgctgcaccgtgtgtggggctacgacgacttccgcggcgagcag
gcggccatcatcgaccaggtggtggccggtggtgacgccctggtgctcatgccgacaggt
ggcggcaagtccctctgctaccaggtgccatcgctcgtccgcgacggcgtcggggtcgtg
gtctcgccgctcatcgccctcatgcaggaccaggtcgacgccctggccgcgaacggcgtc
cgggccgcgttcctcaactccacgcagggccccgacgaacggtcccgggtcgagcgtgcc
gtggtgcagggcgaggtcgacatgctctacctcgcgcccgagcggctccggctcgagtcc
acccgtgcgctcctcgaccgggcgcgcgtctcgctgttcgccatcgacgaggcacactgc
gtcgcccagtgggggcacgacttccgcccggactacctcgagctgagcgtcctccacgag
cggtggccgacggtgccgcgcatcgccctgaccgccaccgcgacgccgcagacccaccgc
gagatctccgcacggctcggcctcgacgacgccgcgcacttcgtcgccgacttcgaccgg
ccgaacatccagtaccgcatcgaaccgaagaccggtgcgctgcagcagctgctcaccttc
atccgcacggagcacagtggcgacgccggcatcgtgtactgcctgtcccgcaactccgtg
gagcgcaccgcgtccgctcttgccgagcaggggatcaacgccctgccgtaccacgcgggc
ctcgacgcccgggtgcgtgcccgcaaccagtcgacgttcctgcgcgaggacggcgtcgtc
atggtggcgacgatcgcgttcggcatgggcatcgacaagcccgacgtccggttcgtggcg
cacctcgacctgccgaagtcggtcgagggctactaccaggagaccggccgtgcgggtcgt
gacgggctgccggccaccgcctggctcgcgtacggcctgaacgacgtcgtgcagcagcgg
cggatgatcgaccagtccgagggcgacgccgcacaccgtcggcagctcagcgcccacctc
gacgccatgctcagcctgtgcgagacgatcgagtgccgccgggtgcggctgctcgcgtac
ttcgggcaggagagcacggcgtgcggcaactgcgacacgtgcatcgcgccgccggagtcg
tgggacggcacggtccccgcgcagaagctgctgtccaccgtcgtgcggctcgagcgtgag
cgccgccagcggtacggcgtctcgcacctcgtcgacatcctgatcggcaagcggtcgccc
cgcgtgcaggaactccaacacgacaccctggcgaccttcggcatcggcgcggacctgtcc
gagggagagtggcgcgcggtcgcacgacaggtgctggcccagggctacgcggcggtgtcg
ggcgacggcttcggcacggtcgtcctcagtcccacgagcgccgaggtcctgaccggcaag
gtgcaggtgcggatgcgtcgcgacccggtcaaggctccgcgggccggccgcagcagtcga
cggacggtcgtcaccgacatgccgcaggaagccgtcggcctgttcgaggccctgcgtgcc
tggcgtgctgccgaagcccgcgagcagggcgtccccgcgtacgtggtgttcaacgacgcg
acgctccggggcatctccgccgtccgacctgccgacgtcgaccagctcggcgagatctcc
ggcgtcggcgcggcgaagctcgagcggtacgggcgcgcggtcctcgacgtcgtcgccgcg
gccgactga
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