Curtobacterium flaccumfaciens: GBG65_12980
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Entry
GBG65_12980 CDS
T06246
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBG65_12980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqf03019
]
GBG65_12980
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_12980
Enzymes [BR:
cqf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBG65_12980
Messenger RNA biogenesis [BR:
cqf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBG65_12980
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GBG65_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
QHN63681
LinkDB
All DBs
Position
complement(2631032..2633161)
Genome browser
AA seq
709 aa
AA seq
DB search
METTAPPSADIAAEAQQALAALTGRPDAVFHPGQLEAISALVEHRQRALVVQRTGWGKSA
VYFLATLLLRRRGGGPTVLVSPLLALMRDQVAAAARAGVRAVSINSANAHEWGETQAALA
RDEVDVLLVSPERLNNPKFRDEQMPTLIARMGMLVVDEAHCISDWGHDFRPDYRRLAELI
RSLPHGVPVLATTATANERVVEDVAEQLTAGPADPVFTIRGSLARKSLRLGVLTLPDARQ
RLGWLLAHLGDLPGSGIIYTLTVSAAEDIARLLRDNGYAVRAYTGRTDTDEREQLEQQLK
GNELKALVATSALGMGFDKPDLGFVVHVGAPSSPVAYYQQIGRAGRATDNADVLLLPGRE
DREIWQYFASASMPTEARAAAVLGALSTDTAMSTVALEGLVDIKRSTLELLLKVLDVDGA
VRRVTGGWVSTGQPWEYDAPRYERVAAARAAEAASMLDYESTSACRMQLLQQDLDDPSAE
PCGRCDNCAGAWFPTAVSDTDSSGAAAALDKVGVEIAPRAQWPSGMSSLGVSVRGKIGPD
ELVQPGRAVARLTDLGWGGPLRALFSPSTPDAPISRELVDGCVRALKDWPWETRPTGVVA
MSSRSRPELVGSLAQALSTIGRLQFLGTLGRAGGTPRGDGATNSAYRLSGVWDTFVVDPS
LAAALQSHEGPVLLVDDLVDSRWTMTVAGRELRRAGAAAVLPFALATVA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaccgccccgccttctgcagacatcgccgccgaggcgcagcaggcgctcgct
gcgctcacggggcgccccgacgcggtgttccaccccggccagctcgaggcgatctcggcg
ctggtcgagcaccggcagcgcgccctcgtcgtgcagcgcaccgggtggggcaagtcggcc
gtgtacttcctggcgacgctgctgctgcgccgacgcgggggcggcccgacggtgctcgtg
tcgccgctgctcgccctgatgcgcgaccaggtcgccgccgccgcgcgggccggtgtccgc
gcggtgtcgatcaactccgcgaacgcccacgagtggggcgagacccaggctgccctcgcc
cgcgacgaggtcgacgtgctcctcgtctcccccgagcgcctgaacaacccgaagttccgc
gacgagcagatgccgaccctgatcgcccggatgggcatgctcgtggtcgacgaagcgcac
tgcatctcggactggggccacgacttccggccggactaccgccgactggccgagctcatc
cggtcgctcccccacggcgtccccgtcctggccaccaccgcgacggcgaacgagcgcgtg
gtcgaggacgtcgccgaacagctcaccgccggcccggccgacccggtgttcacgatccgc
gggtccctggcccgcaagtccctgcgcctcggcgtgctgacgctgcccgatgcccggcag
cggctcgggtggctcctcgcgcacctcggcgacctgcccggcagcggcatcatctacacg
ctgaccgtctcggcggccgaggacatcgcacggctgctgcgcgacaacgggtacgccgtc
cgcgcctacacggggcgcaccgacaccgacgagcgcgaacagctcgagcagcagctcaag
ggcaacgagctgaaggccctggtcgccacgagtgcgctcggcatggggttcgacaagccc
gacctgggcttcgtcgtgcacgtcggggctccctcgtcgcccgtcgcctactaccagcag
atcggtcgtgcgggtcgtgcgaccgacaacgccgacgtcctactcctgcccgggcgtgag
gaccgcgagatctggcagtacttcgccagcgcctcgatgccgaccgaagcccgcgccgcc
gccgtgctcggcgcactgtccaccgacaccgcgatgtcgaccgtggcgctcgagggcctg
gtcgacatcaagcgctccaccctcgaactcctgctcaaggtgctcgacgtcgacggcgcc
gtccgacgtgtcaccgggggctgggtgtcgactgggcagccgtgggagtacgacgcaccc
cggtatgagcgggtcgccgcggcccgcgctgccgaggccgcgtcgatgctcgactacgag
tccacctcggcctgccgcatgcagctgctgcagcaggacctcgacgacccctcggccgag
ccctgcggccggtgcgacaactgcgccggtgcctggttcccgaccgccgtgtccgacacc
gactcgtccggggcagcggccgcgctcgacaaggtcggtgtcgagatcgccccgcgcgcc
cagtggccctcggggatgtcgtcgctcggcgtctcggtgcgggggaagatcggcccggac
gagctcgtgcagcccggccgtgcggtggcgcgtctgaccgacctcggctggggtgggccg
ctgcgtgcactgttctcgccgtccacgcccgatgccccgatctcgcgcgagctcgtcgac
ggctgtgtccgggcgctcaaggactggccgtgggagacccggccgaccggcgtcgtggcg
atgtcctcgcggtcacggccggagctggtggggtccctcgcccaggcgctgtccaccatc
gggcggctgcagttcctcggcacgctcggccgtgccggcgggacccctcgcggcgacggt
gcgacgaacagcgcctaccgactgtccggcgtgtgggacaccttcgtggtcgatccgtcg
ctcgccgccgccctgcagtcgcacgagggtccggtgctgctcgtcgacgacctggtcgac
agccggtggacgatgaccgtcgccggtcgggagctccggcgcgccggggccgccgccgtg
ctcccgttcgccctggccacggtcgcgtag
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