Curtobacterium flaccumfaciens: GBG65_14505
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Entry
GBG65_14505 CDS
T06246
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBG65_14505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqf03021
]
GBG65_14505
03019 Messenger RNA biogenesis [BR:
cqf03019
]
GBG65_14505
Transcription machinery [BR:
cqf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GBG65_14505
Messenger RNA biogenesis [BR:
cqf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GBG65_14505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
PIP5K
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QHN63312
LinkDB
All DBs
Position
2955305..2957647
Genome browser
AA seq
780 aa
AA seq
DB search
MTDNNSAQVEIPSDLRALRLPELQRIASSLGITGLSKLRKGDLIASIEDKRPVDETPAAP
AADVVAETPAEPAATEQPTLPEPAETPAQPAAEAPVADPEAPAESAAPSRARRSRRASSG
GTVNAAPTSAAEHTNHGQTGTEDLLAGLDQVRAEKDAQEAAQSGSQRRGRGQRNTEQRNT
EQRGAEQRAADQGQQASAPTEAEQPSQAGQQGQQAPTSAVQADQDQNESGDQNDQGDQNS
EQGEGGSRRGRRSRGRGRGRGQNAENGEQQNGTDQQNGGQNGGQNAGQQKQNGADQQNGG
QQKQNGGEQQNGQQNGGQKQNDQPKQAEAKQDDKADQKQQQNAGQQKQQTSGQQKQQQQQ
HADEAESGRSRRQRDRKRGRGGQNDDFEPEVTEDDVLIPIAGILDVLDNYAFVRTTGYLP
GPSDVYVSLGQVKKYHLRKGDAVVGSIKQPRDGEQQSRQKYNALVAVESINGQSADEAAA
RVDFNDLTPLYPNERLRLETEPGKLSTRIIDLVSPIGKGQRGLIVSPPKAGKTVVLQAIA
NAVAKNNPEAHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKR
LVELGHDVVLLLDSITRLGRAYNLSTPPSGRVLSGGVDSAALYPPKRFFGAARNIEDGGS
LTILATALVETGSKMDEVIFEEFKGTGNMELRLNRHLADKRIFPAVDVNASGTRREEQLL
SADEVKITWRLRRALAGLDPQQALEIVLRNLKETQSNVEFLVQVQKSVPSTGAHHNGHQE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacaacaactccgcccaggtggagatccccagcgatctgcgtgccctccgtctc
ccggagctccagcgcatcgcctcctcgctcggcatcaccgggctctccaagctccgcaag
ggcgacctgatcgcctccatcgaggacaagcgtcccgtcgacgagacgccggccgccccg
gccgccgacgtcgtcgccgagacccccgccgagccggccgccaccgagcagccgaccctg
ccggagcccgccgagacccccgcgcagcccgctgccgaggcacccgtcgccgaccccgag
gcccccgccgagtcggcagccccgagccgtgcccgtcgttcgcgccgcgcgtcgtccggt
ggcaccgtgaacgccgcgccgacctcggccgccgagcacaccaaccacggccagaccggc
accgaggacctcctcgccgggctcgaccaggtccgcgccgagaaggacgcccaggaagcc
gcgcagtccggctcccagcgccgtggccgtggccagcggaacaccgagcagcggaacacc
gagcagcgtggcgccgagcagcgcgccgccgaccagggccagcaggcgtcggcacccacc
gaggccgagcagccgagccaggcgggccagcagggccagcaggctccgacgtccgccgtg
caggccgaccaggaccagaacgagtccggcgaccagaacgaccagggcgaccagaactcc
gagcagggcgagggcggctcgcgtcgcggtcgtcgcagccgtggtcgcggtcgtggccgt
gggcagaacgccgagaacggcgagcagcagaacggcaccgaccagcagaacggcggccag
aacggcggccagaacgccggccagcagaagcagaacggtgccgaccagcagaacggcggc
cagcagaagcagaacggcggcgagcagcagaacggccagcagaacggcggccagaagcag
aacgaccagccgaagcaggccgaggccaagcaggacgacaaggccgaccagaagcagcag
cagaacgccggtcagcagaagcagcagacgagcggccagcagaagcagcagcagcaacag
cacgccgacgaggccgagagcggccgcagccgtcgccagcgcgaccgcaagcgcggccgt
ggcggccagaacgacgacttcgagcccgaggtcaccgaggacgacgtcctgatcccgatc
gcgggcatcctcgacgtcctcgacaactacgccttcgtccgcaccaccggctacctgccg
ggcccgagcgacgtctacgtctccctcggccaggtgaagaagtaccacctgcgcaagggc
gacgcagtcgtcggttcgatcaagcagccgcgtgacggcgagcagcagagccgccagaag
tacaacgcgctcgtggccgtcgagtcgatcaacggccagtccgccgacgaggccgcggcc
cgcgtcgacttcaacgacctcaccccgctgtacccgaacgagcgcctgcgcctcgagacg
gagccgggcaagctgtcgacccgcatcatcgacctcgtgtcgccgatcggcaagggccag
cgcggtctcatcgtgtccccgccgaaggccggcaagaccgtcgtgctgcaggccatcgcg
aacgccgtcgccaagaacaaccccgaggcgcacctgatggtcgtcctcgtcgacgagcgg
cccgaagaggtcaccgacatgcagcgcacggtgaagggcgaggtcatcgcctcgaccttc
gaccgtcccgccgaggaccacaccaccgtcgcggagctcgccatcgagcgtgcgaagcgc
ctggtggagctgggccacgacgtcgtgctgctgctcgactcgatcacccgcctgggccgt
gcgtacaacctgtcgaccccgccgtcgggccgcgtgctctccggtggcgtcgactcggcg
gcgctctacccgccgaagcgcttcttcggcgccgcgcgcaacatcgaggacggcggctcg
ctgaccatcctcgcgaccgcgctcgtcgagaccggctccaagatggacgaggtcatcttc
gaggagttcaagggcaccggcaacatggagctccgcctgaaccgtcacctcgccgacaag
cggatcttccccgccgtcgacgtgaacgcctcgggtacccgtcgcgaggagcagctgctc
tccgccgacgaggtcaagatcacctggcgtctgcgccgggccctcgccgggctcgacccg
cagcaggccctcgagatcgtgctgcggaacctcaaggagacgcagtcgaacgtcgagttc
ctggtgcaggtgcagaagtcggtcccctcgaccggcgcccaccacaacggccaccaggag
taa
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integrated database retrieval system
