Curtobacterium flaccumfaciens: GBG65_17540
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Entry
GBG65_17540 CDS
T06246
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cqf
Curtobacterium flaccumfaciens
Pathway
cqf03030
DNA replication
cqf03430
Mismatch repair
cqf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cqf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBG65_17540 (dnaE)
03430 Mismatch repair
GBG65_17540 (dnaE)
03440 Homologous recombination
GBG65_17540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqf03032
]
GBG65_17540 (dnaE)
03400 DNA repair and recombination proteins [BR:
cqf03400
]
GBG65_17540 (dnaE)
Enzymes [BR:
cqf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBG65_17540 (dnaE)
DNA replication proteins [BR:
cqf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBG65_17540 (dnaE)
DNA repair and recombination proteins [BR:
cqf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBG65_17540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
QHN63535
LinkDB
All DBs
Position
complement(3583643..3587173)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDSDSFVHLHVHSEYSMLDGAARLSDLVAETAAQGMPAVAVTDHGNMFGAFEFWKAAKA
GGVKPIIGTEAYITPRTHRSDKTRVRWGDGGGDDVSGAGSYTHMTMFAENTTGMHNLFRL
SSKASLEGYYFKPRMDIELLQEYHEGIIATTGCPSGEIQTRLRLGQYDEAVQAAADYRDI
FGKENYFAEVMDHGLEIERRIMSDLIRLAKDLNIPLVGTNDLHYTHAHDAKSHAALLCVQ
SGSTLNDPNRFKFDADEFYLKTPAQMRHVFRDNLEACDNTLLIAERCNVEFDTSANYMPK
FPVPEGETEHSWFEKEVAKGLDYRYPDGISKEVQDRADYEVGIINQMGFPGYFLVVADFI
NWSKNNGIRVGPGRGSGAGSMVAYAMRITDLDPIRHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEAIKYVTEKYGSERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPPVM
GKDIPLTGIFDKDHPRYKEAVDVRTVVETDPEAKTVFDTALGLEGLKRQWGVHAAGVIMS
SDPLIDIIPIMKREQDGQIVTQFDYPAAESLGLIKMDFLGLRNLTIISDALDNIKTNRGT
ELDLENMGLEDPEAYALLQRGDTLGVFQLDGGPMRGLLRLMKPDNFEDISALIALYRPGP
MGANSHTNYALRKNGEQPITPIHPELEEPLKDIIGTTYGLIIYQEQVMAIAQKVAGFSLG
QADILRRAMGKKKKSELDKQYAGFQQGMKDNGYSDAAIKTLWDILLPFSDYAFNKAHSAA
YGVVSFWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIKVMPPDVNESIGFF
AAVGDDIRFGMGAIRNVGFNVVDDIVKARTEKGAFESFHDFLRKIPISSANKRTVESLIK
AGAFDEFGDTRRALVEIHEGAVEGAVKVKRDEAHGNVGFDFDSLFAEAAEDAPSAAVSQV
PDRPEWSKRDKLAFERDMLGLYVSDHPLAGLEIELAKHQSITIADLLTADDSIEGETVTV
AGLLTSVQHRVAKTSGNPYGIVDIEDFGGQIGVMFLGKTYQEFGPSLVPDSIVVLRGRVN
VRDDGKALHAVSMFQPNVGDAMGSGPLTLSLPERQATTTTVTELAAVLGRHQGDTEVRLK
LLKDDVARTFELPFPVNLTPDLFGELKSLLGPRCLV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattccgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgac
ggtgccgccaggctctccgacctcgtggcggagaccgccgcgcaggggatgcccgccgtg
gcggtgaccgaccacggcaacatgttcggcgccttcgagttctggaaggccgccaaggcc
ggtggcgtcaaaccgatcatcgggaccgaggcgtacatcacgccccgcacgcaccgctcg
gacaagacccgtgtgcgctggggtgacggtggcggcgacgacgtgtccggcgccggctcg
tacacgcacatgacgatgttcgccgagaacacgacgggcatgcacaacctgttccggctg
tcgtccaaggcgtcgctcgagggctactacttcaagccccgcatggacatcgagctcctg
caggagtaccacgaggggatcatcgccacgacgggttgcccctcgggggagatccagacg
cgcctgcgtctcggccagtacgacgaagcggtgcaggccgccgccgactaccgcgacatc
ttcggcaaggagaactacttcgccgaggtcatggaccacggcctcgagatcgaacgccgg
atcatgagcgacctgatccgcctggcgaaggacctcaacatcccgctggtcggcaccaac
gacctgcactacacgcacgcccacgacgccaagtcccacgcggcactgctctgcgtgcag
tccggttcgacgctgaacgacccgaaccgcttcaagttcgacgctgacgagttctacctg
aagaccccggcgcagatgcggcacgtcttccgcgacaacctcgaggcctgcgacaacacg
ctgctcatcgccgagcgctgcaacgtcgagttcgacacctcggccaactacatgccgaag
ttcccggtgcccgagggcgagaccgagcactcctggttcgagaaagaggtcgcgaagggg
ctggactaccggtacccggacggcatctcgaaagaggtgcaggaccgcgccgactacgag
gtcggcatcatcaaccagatggggttcccgggctacttcctggtggtcgcggacttcatc
aactggtccaagaacaacggcatccgcgtcggtccgggtcgtggctccggtgccggctcg
atggtggcgtacgcgatgcgcatcaccgacctcgacccgatccggcacggcctgatcttc
gagcggttcctcaacccggaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cggcgccgcggtgaggcgatcaagtacgtcaccgagaagtacgggtcggagcgcgtcgcg
cagatcgtcacgtacggcacgatcaaggcgaagcaggcgctcaaggactcctcgcgcgtc
ctcgggttcccgttcggcatgggcgagaagctcacgaaggccatgccgccgcccgtgatg
ggcaaggacatcccgctcaccgggatcttcgacaaggaccacccgcgttacaaggaagcc
gtcgacgtccgcaccgtggtcgagaccgaccccgaggcgaagaccgtcttcgacaccgcg
ctcgggctcgaggggctgaagcgccagtggggcgtgcacgctgccggcgtcatcatgtcg
agcgacccgctcatcgacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acgcagttcgactacccggcagcggagtcgctcggcctgatcaagatggacttcctgggg
ctccgcaacctcacgatcatcagtgacgccctcgacaacatcaagacgaaccgtgggacc
gagctcgacctcgagaacatggggctcgaggaccccgaggcgtacgcgctcctgcagcgc
ggcgacaccctcggcgtgttccagctcgacggtgggccgatgcgtggcctgctgcggctg
atgaagcccgacaacttcgaggacatctccgcgctcatcgccctgtaccgtccggggccc
atgggtgcgaactcgcacacgaactacgcgctccgcaagaacggcgaacagccgatcacg
ccgatccacccggagctcgaggagcccctcaaggacatcatcggcacgacctacggcctg
atcatctaccaggagcaggtcatggccatcgcgcagaaggtcgccgggttctccctcggc
caggcggacatcctccgccgcgcgatgggcaagaagaagaagtccgagctcgacaagcag
tacgcgggcttccagcagggcatgaaggacaacgggtactccgacgcggcgatcaagacg
ctgtgggacatcctgctgcccttctccgactacgcgttcaacaaggcgcactcggcggcc
tacggtgtggtgtccttctggaccgcgtacctcaaggcgcactacccggctgagtacatg
gcggcgctgctgacgagcgtcggcgacgcccgggacaagctcgcgctctacctgaacgag
tgccgccggatgggcatcaaggtgatgccgccggacgtcaacgagtcgatcggcttcttc
gccgcagtcggcgacgacatccgcttcggcatgggtgccatccgcaacgtcgggttcaac
gtcgtcgacgacatcgtcaaggcgcggaccgagaagggcgccttcgagtcgttccacgac
ttcctgcgcaagatcccgatctcgtcggcgaacaagcgcacggtcgagtcgctcatcaag
gccggtgccttcgacgagttcggcgacacccgccgagccctggtggagatccacgagggc
gcggtcgagggcgcggtgaaggtcaagcgcgacgaggcccacggcaacgtcgggttcgac
ttcgactcgctcttcgccgaggcagccgaggacgccccgagcgccgcggtgtcgcaggtg
ccggaccgtccggagtggtccaagcgcgacaagctggccttcgagcgggacatgctcggg
ctctacgtgtccgaccacccgctcgcggggctcgagatcgagctcgcgaagcaccagtcg
atcaccatcgccgacctgttgacggccgacgactcgatcgagggcgagacggtcaccgtc
gccggcttgctgacgagcgtgcagcaccgggtggcgaagacgagcggcaacccgtacggc
atcgtcgacatcgaggacttcggcggccagatcggcgtgatgttcctgggcaagacgtat
caggagttcggcccgtccctggtgcccgactcgatcgtcgtcctgcgcggccgcgtcaac
gtccgcgacgacggcaaggccctgcacgcggtgagcatgttccagccgaacgtcggtgac
gcgatgggctcgggcccgctcaccctgtccctgccggagcgccaggcaacgacgaccacg
gtgacggaactcgccgccgtgctcggccgccaccagggtgacaccgaggtccggctgaag
ctgctcaaggacgacgtcgcgcgcaccttcgagctgccgttcccggtgaacctgaccccc
gacctgttcggcgagctgaagagcctgctcggaccccgctgcctggtctga
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