Chenopodium quinoa (quinoa): 110682014
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Entry
110682014 CDS
T05764
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110682014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110682014
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110682014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
110682014
NCBI-ProteinID:
XP_021713910
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MDKSTTKRKKNTGKSKFQSVDIIRDNQPLKFRQNSDKNDEKSNPQIQDDEADWEEGCIPS
SSCPNNNNVNSVNQNNGVTIEFDALPESPKKKRIRRATAEDKEFAELVHKVHLLCLIARG
RLIDAACDDPLIQASLLSLLPPHLLKLSEVAKLTANALTPLVSWFHQNFKVKSPSSAEKP
FQSALAYALEAQGGSPEEVAALSVSLFRALNLTTRFVSVLDVTSLKPEVDENEQSYNASS
RERKDIFNSSTLMVSKMSTGTSSTKSSASHGNIHITSVTSVSEAKNGRLPTNIEVKDSLA
SNQLIKSDLPINETQNASEEDKCPRKKGDLEFEMQLQMAMSATALVAPERKPEASTSGSP
TSPLASLSPFKRIKRITEESPSSSHAISTAIGSRKVGAPLHWAEVYCSGENMTGKWVHID
AVNSIVDGELKVEAAVTACKKSLSYVVAFAGHGAKDVTRRYCEKWYKISPKRIYLEWWDA
VLAPLKQLESRATGGMVPVHHKDMKSTDLVDSRSSLEDMELATRALTEPLPTSQQAYRTH
PLYAIEKWLTKYQILHPRGPVLGFCSGHAVYPRTCVQVLRTKERWLREGLQVKESELPAK
VVKSSSKNRRGQTIEVEDLCEGGSDEVVSLFGKWQTEPLCLPPAVNGIVPKNERGQVDVW
SEKCLPPGTVHLRFPRLVPVVKRLGINFAPAMVGFEFRNGRSIPVYEGIVVCTEFRETVL
EAYAEEEQRREEEERKREERQALSRWYQLLSSMVVRQRLNNTYLSNVESKTVTEPLKTRN
KSSCAASANVNESTVPHRDNVRGAKIHDSDKMHLQNHEHVFLTDDESFDEDSMTRTKRCS
CGVSVQVEEL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggataaatccaccactaaacggaagaaaaacaccggaaaatccaaattccagagtgta
gatatcattagggataatcaacctctcaaattccgtcaaaattccgacaaaaatgacgaa
aaatcaaaccctcaaattcaagacgatgaagccgattgggaagaaggttgcattccatct
tcttcatgtcctaacaacaataatgttaatagtgttaatcaaaataatggggttaccatt
gaatttgacgctttgcctgaatcgccgaaaaagaagcgtattcgaagagctactgctgaa
gacaaggaatttgcagagcttgtgcataaggttcatttgctttgtttgattgcaagaggg
cggttaattgatgctgcctgtgatgatcctcttattcaggcttctttactatcactttta
ccaccacacttactgaagttatcagaagttgccaaacttactgctaatgctttgactcct
cttgtctcttggtttcatcagaatttcaaagtgaaaagccccagcagtgcagaaaaacct
tttcaatcagctctagcatacgctcttgaagcacaaggagggagtcctgaagaggttgca
gcgctgtctgtatcattatttagagctctaaatcttacaacaaggtttgtgtcagtgttg
gatgtaacttccttgaaaccagaagttgatgaaaatgagcaatcatataatgcaagcagc
agggagagaaaagatatttttaactcttcaacacttatggttagtaaaatgagcacaggg
acaagttctacaaaatcatctgcttcccatggaaatatccacatcacttctgttacctca
gtttctgaagctaagaatggacgcttgccaacaaatatcgaagttaaagattcacttgct
tctaatcagttgataaagtcagatctacccattaatgagacacagaacgcttctgaggag
gacaagtgcccaaggaagaaaggagacttggaatttgagatgcagttgcaaatggctatg
tccgccacagcactggtagctcccgaaaggaaacctgaagcatctactagtggttcaccc
actagtccattagcttccctttctccctttaaaagaataaagagaatcactgaagaatct
ccttcatcctcccatgctatatctactgcaattggttcaagaaaagtaggagctccatta
cattgggcagaggtctattgctctggtgaaaatatgactggaaagtgggtccatattgat
gctgttaattctatagttgatggagagctgaaggtagaggctgcggttactgcatgcaag
aagtctttgagttatgttgttgcctttgcaggccatggggctaaagatgtcacgcgcagg
tactgtgaaaaatggtacaaaatatccccaaaaagaatttacttagaatggtgggatgct
gtgttagcgccattgaagcagttggagtctcgtgcaactggtggaatggtccctgtgcat
cacaaagatatgaagtcaacagatttggttgacagtaggagcagtcttgaggacatggag
ttggcaacgagggcattaactgaacctcttcccacaagtcaacaggcttatagaactcat
ccactgtacgctattgaaaaatggcttacaaagtatcagattttgcatccaagaggtccg
gtacttggtttctgttctggtcacgctgtttatcctcgaacttgcgttcaagtactccgc
acaaaagaaagatggctccgtgaggggctgcaagtaaaggaaagtgagcttcctgcaaag
gtggtgaagagtagctctaagaatcgtagaggacaaactattgaagtagaagatctctgc
gagggtgggtcagatgaagttgtttctctgtttggaaagtggcaaactgaaccgttgtgt
ttgcctcctgctgtaaatggaattgtgcccaagaatgagcgtggtcaagtggatgtttgg
tctgagaagtgcctccctcctggcactgtgcatctgcggtttccaaggttggttcctgtt
gtgaagagactcgggatcaattttgctcctgccatggttggatttgaatttcgaaatgga
cggtcaatacctgtatatgaaggcattgtggtctgcacagaatttagagaaacagtttta
gaggcatatgcagaagaggagcagcgaagagaggaggaagaaaggaagagggaggagagg
caggcactttctcggtggtaccaacttctatcatctatggttgttcgacaaagattgaac
aatacttatttgagcaatgtggaatcaaaaactgttactgaacccttgaagactcggaat
aaatcttcatgtgctgcttctgcaaatgtgaatgaaagtactgtgcctcaccgagataat
gtccgtggagctaagattcatgactcagacaaaatgcacttgcaaaatcacgaacatgtc
tttttgacagatgatgagagttttgatgaggatagcatgactcgaacaaaacggtgtagc
tgtggagtatcagttcaggtggaagagctttaa
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