Chenopodium quinoa (quinoa): 110682035
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Entry
110682035 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110682035 isoform X1
KO
K19026
spatacsin
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110682035
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110682035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
110682035
NCBI-ProteinID:
XP_021713934
LinkDB
All DBs
Position
Unknown
AA seq
3181 aa
AA seq
DB search
MGVGENGEGPAVLQLHRWDPSHIRSDLSEYQEAFLSPTRELLLLHSYQSEALLLPLSRDD
SYCISSENCKYESQESVNLSSSSACRQDSLGDVPSIPESVEGVSNNVYSAKSNISQSNTF
PFISDVNSLAWGLCGDTYKQNKEAPFREFLIVVGNCGVVFHAFRQIYEPNATQSFEDENK
PGRWVEWGPGSVSPCDNEALGDVSVASRTSGAGGNVSYTGQDSTSHVVSSSISKKWLQSF
LSSSKVMESDGTVRTCFPEKLVLPCSATVVSFFVDFRDSVLVNFYSSTRSVLDESVHGEK
RVQIPLDHTSLDSIESVANVSTSSSYTCFRVFSSWFHYMIGFVLSAGFDNTKISSDFSCE
GQDIVVVVGLLDVYGIQWLYNVKLPQKGIGLEPEWVDFQISDKFLISLNKFGSILLHGAV
TGEYIAYLDILHIHGVKPEKNLSEQETSSIAMNIADGNVLRNKFDDTQACSVANKRSFRR
LIVAPYSCQFSVVDECGVLYIICASDHVPDKYVMIDKILPQYLKLGVLAPWVVGHSNISQ
QNVFCTSSGCEKSVIKDDLGSGQHVQNWHIQGMVSQNDLNLNGFATISQQSSPTVSESRC
KCCIRKLFIPIARHGGADIICFSSFGVTRLIRRSSIDERSFIVHTSLYIDSKFCDDNCLN
LVNRTLDLQSEANVVDEEAVGCIFQGSLYLVTRKGVSIVLPSVSLSSNFHTIDSISYHST
KATQSTALNLQKSLIYDKSKQLRSSWQVAVLDRIILYEGPHEADRLCLENGWNLGFSRLR
RLQLALAYFRFEEMDLALGMLAEVDMAEEGILLLIFGAIYMIVDRVGSDAEVSAALRILA
LGALFAIQMLRKFAILEFTNECSQPLLMSSKDHRKFTDSRRLHEMAYYLEIIRNIQCQLA
AKFTRLGKGSLQVDTLEAHPEGSQNSTEDHYQLSSATDDVILEKPNKHEPALHERDASFN
ESEKLSLVPVEPLGSNCLVNSEMPDEESILVSGAIPRTKLFPMENTKEMFARWEMDNLDL
RNVVKDALLAGRLPLAVLQLHLHQRKKFVDDKKPSDTFSEVRDIGKAIAYELLLKGETTL
AVSTLQKLGEDLEACLKQLIFGTVSRSLRKQIAEEAKKHGFLGLDELAILERISLIERIY
PCNNFWKTYAFRRKEGREYLLPTEASGNYRLHLLFPPVFRNLVIECGDIDGVVLGSWANF
NGVGSTEIDDDSSHAGYWAAAAVWSYVWDQTTIDRILLDQPFLLGVHVMWESQLEYHVCH
NDWEEVSKLLYMIPSSLLAEQSLLINLDSLQSSSSTRYSMEFPDYGSYACSSDELDAVCI
DIPKVRIFNSSATGMCSSWLRVLISKELAKRFIFLKEYWDGAGEVIFLLAQCGFLDGENG
MAAQNGSLDHSTFLDSANVGVLHPNTLQAFHKLLVHYAAQNYLPYFLDLYLDHHKLALDD
EAISALLEATGDHQWAKWLLFSRIKGHEYDASFFNARALLVRDVSSDSSLPVLEANEIIS
TVDDIAEAGWLMAALATLMFAPLPIQSCLSSGSVKRSSNSFQCTLENLRPALQKFPTLWR
TLVASCIGHDTTQSFWGLKGRNALSAYINWRDSVFYSSGHDTSLLQMLPCWFPTSLRRLI
QLFVQGPLGWQSMTSLTAEEAYLQRDIEYLMNVQEYSEISAMSWEAAIQKQIEQELYPSS
IEETGLALEQHLHRGRALAAFNQLLGSRVHQLKSGVIDRGQSNATLRGQANVQSNVQTLL
SPLTQDEESFLSSVVPLAITHFQDHVLVASCALLLEICGLSASVLRVDVAALRRIHSFYR
SNQIMQQNQLLSNNATLHAASSEATVADSVAQALADYYLHQSGNINKQEDAQKPATNHLP
PTLLLVLQHLEKASLLSYAGEKTCGSWLLSGEGDGNELRSQQKAASQHWNLVTLFCQMHQ
IPLSTVYLAFLARDNDWVGFLSEAQVGGYPFDLVIHVAAKEFTDPRLRTHILTVLRGMQW
RKKNVVPSNSDSSKGRNESSHPDQTLFISAELFQILAQCEKQKESGKSLLLKAKELSWSL
LAVVASCFPDVAPLSCLTVWLEITAAREICSSRENEIATQIANNVGAAVETSNSLPAGDR
VSTVHYNRKSSKRRRFMNNISEDFSSATASCTSNDHAKTLVEELKELGTKDDVKLVKSSD
DLSTSLPKLVAILCQRNQFFPLLRAFEMFLPSCPLLPFIRALQAFSQMRLSEASVHLGVF
SSSKEEASWISSTAVKAADAILSTCPSPYEKRCLLQLLASSDFADGGSAAAYYQRLYWKI
NLAEPALRKHEDLQLGNETLDDASLLTALENNGYWEQARNWARQLEASGTPWKSAAHHVT
ERQAESMVAEWKEFLWDVPEERVALWRHCQNLFIRYSFPALKAGLFFLKHAEMVEKELPS
RELHELLLLSLQWLSGIITQSTPVCPLHFLREIETRVWLLAVESEAHIKGEQVSNFTRSS
QDQMSGNSANIVDQTADVVMKMDSHINSVKNRASEKGDIKENNNLRHKSSQTWDAGISAA
TGSTKIKRRTKPYGSSRQSMTEIDRSADADADSDADGSSLPSLNHVYDLQDENLRIDASF
SRWEERIGPAELERAVLSLLEFGQITAAKQLQHKLSTGHVPFQLKIVDAALKFAELLTPL
QKHSLLMLDEDLRSLIQSYNLPTEDHLFDPLQVLESLSDILTEGSGRGLCKRISAVLKAA
NVLGVSFAEAFEKQPTDLLQLLSLKAQDSFDEARLLVQSHSIPATSIAKILAESFLKGLL
AAHRGGYIDSQKEEGPAPLLWRFSDFLKWADLCPSEQEIGHALMRLVITGQEIPHACEVE
LLILSHHFYQSSACLDGVDVLVALAATRVEAYVSEGDFSCLARLITGVGNFHGLNFILGI
LIENKQLDLLLQKYSAAADANSAVAETVRGFRMAVVTALKHFNPNDHDDLAMVYKHFDLK
HETASLLESRAEQSYQRWHLRPDKDHNEDLLVSMHFYIEAAEVHSSIDAGNKTRSACAQA
SLVSLQIRMPDIQWLNLSETSARRLLVEQTRFQEALIVAEAYKINQPSEWTPVLWTQMLK
PEVVEQFVAEFVAVLPLQNSVLVELAKFYRAEMVARVDQSHFSVWLTGGGLPAEWAKYLG
RSFRCLLKRTRDLRFRLQMASIATGFIDVVDACNKTLDKVPDNAGPLVLRKGHGGAYLPL
M
NT seq
9546 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggagagaatggagaaggtcctgctgtactgcagttgcacagatgggatcct
tctcatatccgatcagatctatcggagtatcaagaagcttttctttctcctacgagggag
ctcttgctattgcattcatatcaaagtgaagctttgttgctccctttatcaagagatgat
tcctattgcatatcctctgaaaattgtaaatatgagagtcaagagagtgtaaatttgtca
tcttcgtcagcttgtaggcaagattcattgggagatgttccaagtattcctgaatcagtg
gaaggggtttcgaataatgtttattctgctaagagcaatatttcacaatcaaatactttc
ccttttatatctgatgtaaattctctggcttggggcttgtgcggagatacttataagcag
aacaaggaagcaccatttagggaatttctcatagtggttgggaattgtggtgtagttttc
catgcttttcgtcaaatttatgaacctaatgcaacacagtcatttgaagatgaaaataag
cctgggagatgggtggaatgggggccgggtagtgtgtctccttgtgacaatgaagctctt
ggagatgtcagtgtggcaagtaggactagtggagctggaggaaatgtgtcttatactgga
caggattcaacaagccatgtggtgagttcctcaatctcaaaaaagtggctgcagtctttt
ttaagctcatccaaggttatggaatctgatggcactgtacggacctgttttcctgagaag
ttagtgcttccctgctcggcaactgttgtctcattctttgttgatttcagggattctgta
ctcgtgaacttctattccagtacccgttctgtactagatgaaagtgtacacggagagaaa
agagttcaaattccattggatcatacatcattagatagcatcgaatctgttgcaaatgtt
tccaccagcagttcctatacctgtttcagagtattttcaagctggtttcactacatgatt
gggtttgttttgtcagctgggtttgataataccaaaatcagtagtgattttagttgtgaa
ggtcaggacatagtggttgttgttggtcttttagacgtatatgggattcagtggctgtat
aatgttaagcttccccaaaagggtataggcttggaacctgagtgggtagactttcaaatt
tctgacaagtttctcatttctcttaacaaatttggatccattcttcttcatggtgcagtc
acgggggaatatattgcatatttggatatcttacatatacatggagttaaacctgaaaag
aatttgtcagaacaagaaacttcatcaatagctatgaatatcgcagacggcaatgtatta
cgaaataagtttgatgatactcaagcttgcagcgttgcaaataaacgaagtttcagaaga
ttgattgttgctccatattcctgtcaattcagtgttgttgacgaatgtggcgtactttat
ataatatgtgcaagtgatcatgtgcctgataaatatgttatgattgacaagatacttcca
caatacctgaagcttggtgttttggccccatgggttgttggtcattctaatattagtcaa
cagaatgtcttttgcacttcttcaggctgtgagaagtcagttataaaggatgacttagga
agtggtcaacatgttcaaaattggcatattcaggggatggtcagtcaaaatgatttgaat
ttgaatggcttcgctacgatttcccagcaaagcagtccaactgtttcagaatcaagatgc
aagtgctgtataaggaagttattcattcccattgcaagacatggtggggcagacattatt
tgtttttcttcttttggggtcacccgtctaattagaagaagtagtatcgatgaaaggagt
tttattgttcataccagtttgtacatagattcaaagttttgtgatgataattgcttgaat
cttgtaaacagaacacttgacctgcaaagtgaagcaaatgttgttgatgaagaggctgtt
ggttgcattttccagggttctttatatttagttacaaggaaaggagtctcaatagttctt
ccctctgtctcattgtcatctaacttccataccattgactctataagctaccattccact
aaagctactcaatcgactgcacttaacttacaaaagtcattgatatatgataaatcaaaa
cagcttcggtcttcatggcaagtcgcagttcttgatagaattattctatatgaaggtcct
catgaagcggataggttgtgtttggagaatgggtggaatcttggattttcccgcctgcgt
cgtttgcaattggcgttggcatactttagatttgaagagatggacctagccttaggaatg
cttgcggaggttgatatggctgaagaagggattttgttattgatctttggtgccatttac
atgatagttgacagagttggaagcgatgctgaggtttctgctgcactaagaatactggca
ttaggagctcttttcgcaatccagatgcttcgtaaatttgccattttggaatttacgaat
gaatgttcacaacctctactcatgtcttctaaagatcatagaaaattcacagattctaga
aggctacatgagatggcctattacctggagattattcgtaatatccaatgtcaacttgct
gcaaaattcacaaggctggggaaaggatcgttacaggtggataccttggaagcacatcct
gagggttcacagaactcaaccgaggatcattatcagctttcttctgcgactgatgatgtg
atattggagaaaccgaacaaacatgaacctgctttacatgaaagggatgcaagctttaac
gaatctgagaaactttcattagtgcctgttgaaccgctgggatctaattgtcttgtgaat
tcagaaatgcctgatgaagagtccattcttgtgtcaggggcaatcccaagaacaaaactt
ttccccatggagaacactaaagaaatgtttgcacgttgggagatggacaatttggactta
aggaatgttgttaaagatgctttattggctggccgtcttccattggcagttcttcagctc
catcttcatcaaagaaaaaaatttgttgatgacaagaagcccagcgatacattttctgaa
gttcgtgatattggaaaggctattgcatatgagttactcttaaagggtgagactacattg
gctgtttccacattgcaaaagcttggagaagacttagaagcttgtttgaagcagttgata
tttggtacagtgagcagatcactgcggaagcaaatagctgaagaagcgaaaaaacatgga
tttctcgggttagatgagctggcaattcttgaaagaatatcattgattgagaggatttac
ccatgcaataacttttggaaaacatatgcgttccgaagaaaggaagggagggaatattta
ctgcctactgaagcatctggaaattatagattgcatctcttattcccccctgttttcaga
aatcttgttattgaatgtggtgacattgatggagtagttttaggttcatgggcaaatttt
aatggtgttggcagcactgagattgacgacgacagcagccatgctgggtattgggctgca
gctgctgtgtggtcgtatgtttgggaccaaacaactattgatcgtattttgctggatcaa
ccttttctattgggtgttcatgtgatgtgggaatcacagttggaatatcatgtatgccat
aatgattgggaggaagtatctaaacttttgtacatgattccaagctcgttactagctgaa
caaagtctcctaatcaatctggacagtttgcagtcttcttcctcaactagatacagtatg
gaatttccagattatggcagttatgcatgctcttctgatgaattagatgcagtttgtatc
gacattccaaaagttaggatttttaattcttcagccactggaatgtgctcatcatggttg
agagttctcataagtaaagagcttgccaagagattcattttcctaaaagaatattgggat
ggagcaggagaagttatctttctgctggcccaatgtggctttcttgatggagaaaatggg
atggctgctcagaatggatccttggaccactcaacgtttttggattctgcaaatgttgga
gtattgcacccaaatactctacaggccttccataaacttcttgttcattatgctgcgcaa
aattacttgccatatttcctagacctttatcttgatcatcacaagctggcccttgatgat
gaggctatcagtgcattactggaagctacaggggatcatcaatgggcaaaatggttgctc
ttttcaaggattaaggggcatgaatatgatgcatcgttctttaatgcccgtgcacttcta
gtgcgtgatgtatcctctgacagtagcctccctgttttggaggcaaatgaaataatttct
actgtcgatgatattgctgaagctggatggttaatggcagctctggccacattaatgttt
gctcccttgcctatacaaagctgcctgagtagtggtagtgtgaagaggagcagtaactcc
tttcagtgtacgttggaaaatttgaggccagccctccaaaagttccctactctatggcgc
acacttgtggcatcctgtataggacatgatacaactcagagcttctggggtcttaaaggg
aggaatgctttatcggcatatatcaattggcgggacagtgtcttttattcatctggacat
gacacatcacttctgcaaatgctgccttgctggtttcccacaagtttgcggagattaatt
caactttttgttcagggtccactgggatggcagtctatgacaagtctgacagccgaagaa
gcttatctgcagcgtgatatagaatatcttatgaatgtccaggaatactctgagattagt
gcaatgtcctgggaagcagctatccagaaacaaatcgaacaagaattgtatccttcttca
atagaggaaactggacttgctctggagcagcacttgcatcgtggacgtgcactggctgcc
tttaaccaacttcttggttctagggtccatcagcttaaatctggtgtcattgacagagga
caatcaaatgcaacgcttcgtgggcaagcaaatgtccagtcaaatgtgcaaacactgctt
tccccactgacacaagacgaagaatcttttctttcctcggttgtgcccctggctataacc
cattttcaagatcatgtgctggttgcttcatgtgctttactgctggagatttgtggttta
tctgctagtgtgcttcgtgttgatgttgctgcgttgagacgaatacattccttttataga
tccaatcaaattatgcaacaaaaccaactcttgtccaacaatgctacactacatgctgct
tctagcgaagcaactgttgcagattctgttgctcaagctctggcagattattaccttcac
cagagtggaaatataaataaacaggaggatgctcagaagcctgctacaaatcatctgcct
ccaactctattgcttgtccttcagcatctggagaaggctagcctcctgtcatatgctggt
gagaaaacatgtggctcttggctgttgagtggcgaaggtgatggaaatgaattaagatct
caacaaaaggctgcaagtcagcactggaatttagttactctattttgccagatgcaccag
attcctttgagcactgtgtaccttgctttcttagcaagagacaatgactgggttggattt
ctctcagaggcacaggttggtggatatccatttgatttggtgattcatgtggctgctaaa
gagtttactgatccacgtcttaggactcacatattgacagtattgagaggcatgcagtgg
aggaagaagaatgtcgtgccttctaattcagattcttcaaaaggaaggaatgaatcttcc
catcctgatcaaactttatttatatcagctgaactttttcaaatattagctcaatgtgaa
aaacaaaaggaatcaggaaagtcacttcttttgaaggcaaaggagttgagctggtctttg
ttggctgtggttgcttcatgttttcctgatgttgctccactatcttgcttaacagtctgg
ctggaaattacagctgcaagggagatatgctcaagtagagaaaatgaaattgctactcag
atagcaaataatgttggagctgctgtagagacttcgaattccctgccagctggtgataga
gtttctactgtccattataatcggaaaagttcaaagcgtcgacgtttcatgaataatatt
tctgaggacttttcttctgccactgcgagttgcacctcaaatgatcatgcaaaaacactt
gttgaagagttgaaggaattaggaaccaaggatgatgtcaaattggtgaagagttctgat
gacttgtctacatctctgcctaaactggtcgctattctttgtcagcgaaatcagtttttt
cctttgctgagagcatttgagatgtttcttccttcatgtcctttgttaccattcattcgt
gctcttcaggcattttctcagatgcgtctatctgaagcttcagttcatttgggggtgttt
tcatccagtaaggaggaggcatcttggataagctcgactgctgtgaaagctgctgatgct
attctttcaacatgcccatcaccttatgaaaaaagatgcttactgcagcttctcgcttct
tctgattttgctgatggaggatctgctgctgcatattatcaacgtttatactggaaaatc
aatttagcagagcctgcgcttaggaagcatgaggatcttcaattaggaaacgagactttg
gatgatgcttctctcttaacagcacttgaaaataatggttactgggaacaagcccgcaat
tgggcacgccaattggaggccagtggcacgccatggaagtctgctgctcaccatgttact
gaaagacaggcggagtcaatggttgctgaatggaaggaatttctttgggatgtacccgaa
gagagagttgcattatggcgtcattgtcaaaatctgttcattagatattcatttcctgct
ctaaaggcaggattgttctttctcaaacatgcagagatggtggagaaagaacttccctcg
agagagctacatgaattgttacttctttctctacaatggttaagcggaataattacgcag
tctacccctgtatgtcctcttcatttcttacgggaaattgaaaccagagtttggctgcta
gctgtagaatctgaagctcatataaagggcgagcaagtttccaattttaccagatctagt
caagatcagatgtcaggaaatagtgccaacatcgtggaccaaactgcagatgttgtcatg
aaaatggatagccacataaattcagtgaaaaatagagcttctgagaaaggagatatcaaa
gaaaataataatttgcgtcacaagagctcacaaacctgggatgctggcatatcagctgca
actgggagcacaaagattaaacggaggactaaaccatatggttcctctagacagtccatg
actgaaatcgacaggagtgctgatgctgatgctgattctgatgctgatgggagttctctc
ccttctttgaaccatgtatatgacttgcaagatgaaaatctgagaatcgatgcatcattt
tcacgttgggaagaaagaattggaccagcagaacttgaaagggctgtcctttcattattg
gaatttggacaaataactgctgccaagcaactgcaacataagctttcaactggccatgtg
ccttttcagttgaaaattgtagatgctgccctaaaatttgcagaactgttaacaccactg
cagaagcattccttgttaatgctggatgaggatttacgttctcttatccagtcatataac
ctgcccactgaagatcatctctttgatccactccaggtgctagagagtttatctgacata
ttgactgaaggtagtggacgtggactttgcaagagaatctctgctgttttgaaggctgct
aatgtcttgggtgtttcatttgcggaagcctttgagaagcagccaactgatttgttacag
ttgctttctcttaaagcacaagattcttttgacgaagcaagacttttggtacagtctcat
tctataccagctacaagtattgcaaaaattttggcagaatccttcttgaagggtttatta
gcagcacatcgtggtggatacattgattctcaaaaggaggaagggcctgctcctttgttg
tggcggttttcagactttttgaagtgggctgatttgtgtccctcggaacaagagataggg
cacgcattaatgcgattagttattacgggtcaagaaattccgcatgcctgtgaggttgaa
cttcttattctgtcgcaccacttctaccagtcatcagcttgtcttgacggggtcgatgtt
ctcgtagcccttgcggcaacaagggttgaggcttatgtttctgagggtgacttttcttgc
ttggctcgtcttattactggagtggggaacttccatggactgaattttatacttggcatt
cttattgaaaataaacaactggatcttcttcttcaaaagtattctgcagctgctgatgca
aacagtgctgttgctgaaactgtccgaggatttcgcatggctgttgttacagcactaaag
cattttaaccccaacgatcatgatgatttagccatggtttataaacactttgacttgaag
cacgaaacagcttctttacttgagtcacgagctgaacagtcttatcagcggtggcacctg
cgccctgacaaggaccacaatgaagatctccttgtatcaatgcacttttacattgaagct
gcagaggttcactcttctattgatgctggcaataaaacgcgttctgcttgtgcacaggct
tccctcgtatcccttcaaattcgtatgcctgatatccagtggttgaatctgtctgagacc
agtgctcgcaggttactggttgagcagacacgtttccaggaagcattgattgtggctgaa
gcttataaaattaatcaacctagtgaatggacaccggtgttgtggacccagatgcttaaa
ccagaagttgtagagcaatttgtggctgaatttgtggctgtgcttcctctccagaattct
gtgctcgttgaattggcgaaattttacagagcggagatggtagcaagggtagatcaatcc
catttttcagtctggctcacaggaggaggtttaccagctgaatgggccaagtatttgggg
aggtcatttcgctgtttgctaaaaagaacaagagatttgaggttccgtttgcagatggct
tccattgcaactgggtttatcgatgtggttgatgcatgtaacaagacattggacaaggtt
cctgacaatgctggaccacttgtgctgagaaaagggcacggtggggcatatctcccattg
atgtag
DBGET
integrated database retrieval system
