Chenopodium quinoa (quinoa): 110682172
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Entry
110682172 CDS
T05764
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110682172
09122 Translation
03013 Nucleocytoplasmic transport
110682172
03015 mRNA surveillance pathway
110682172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110682172
03041 Spliceosome [BR:
cqi03041
]
110682172
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110682172
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110682172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
110682172
NCBI-ProteinID:
XP_021714127
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MKASSGFPVLDNRSIDQWKVTELKEELKRRKLTTRGLKEELVRRLDESLRNEMEAEKQEA
DNGAQNIQPNNVSQVAVTEQTGSVIGELGLGIPVNAEVNVGVADVEITKFDDVSLQGNSQ
VSIEQPVEGQVSIEQPVEGKVIIEEQESVVVLGNDQPPEVGALAANDVPSVGLGNEISES
LSSDIAVDGKGSQDGNIERVDEGSRAQEQSEDIKPLHDDEKLESSDANNQVSEVSSSLGF
PVKSNSISTDSVSFNEKNDLKDNIIADNVKLESDVKPEMVQPSSSDLFPDGGNSHPSDVE
EPHENKVSVQETDNSVTNADVSQKIYSADLGSSEKLNLDRSSGDDSMEEDALESKHIDSN
YKFEEVVEKNEKIEVTTIEEERPIATMDIDVPIIEKGTDYENNVVAAASTDKRKLADQEA
VLNNEPTKRQRRWKTESNEVKEPQISNNSPRAAVKDVAQPAVLKRNLSGSKSVSGADEPP
KEREVPPSSKPATNSLRIDRFLRPFTLKAVQELLSKTGTVTSFWMDHIKTHCYVTYSSIE
EAMETRNAVYNLQWPPNGGRQLLAEFVDPEEVKARSEKPAPSPAAPVSSGPAVAELSPTV
TQPSPRQQSLRQQMAQQPSLPPPPPLTNPPQAREWAVPPPPPPMEKVEAPIVTLDDLFRK
TKATPRIYYLPLSDEQVAAVLEARSRNSKQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcttcgtcggggttccctgttttggataaccgatcgattgatcaatggaaagtt
acggaattgaaggaagaactcaaaaggcgaaagctgaccaccaggggtttgaaggaagaa
ctagtgagacggttggatgaatctctgcgcaatgaaatggaagctgagaaacaagaggct
gacaatggtgctcagaatatacagccaaataacgtatctcaagtcgctgtaactgaacaa
actggtagtgtaatcggtgaattaggattaggcattcccgttaatgctgaggttaatgtg
ggtgttgctgatgtcgaaatcacaaagtttgatgatgtgtcacttcagggtaatagccag
gttagtattgaacaaccagttgagggacaggttagtattgaacaaccagtcgagggcaag
gttattatcgaagagcaggaatctgtggtagttctagggaacgatcaacctccagaggtg
ggtgcattagctgcaaatgatgtaccttctgttggtttaggcaatgagattagtgagagt
ttgtcatctgatatagcagtggacgggaagggttcgcaagatggtaatatcgagagggtt
gatgagggttcaagagcgcaggagcaatcggaggatataaagccactacatgatgatgag
aagctggaatcttctgatgcaaacaaccaggtatctgaggtcagctctagtttagggttt
cccgtaaaatctaattctatttctactgattctgtgtcttttaatgaaaagaatgaccta
aaggataacataattgctgataatgttaaattagaatctgatgttaagcctgagatggtg
caaccatcatcaagcgatttattccccgacggtggcaattcacatccaagtgatgttgag
gagccacacgaaaacaaggtttctgttcaagagacagataacagtgttacaaatgcggat
gtgagccagaaaatttatagtgcagatttgggttcttctgaaaaattaaacttagatcga
agttcaggtgatgattccatggaagaagatgctttggaaagtaagcatattgattcaaat
tataaatttgaagaagttgttgaaaagaatgagaaaattgaggtcactactattgaggaa
gaaaggcctattgcaaccatggatattgatgttcctattatagaaaaaggtactgattat
gaaaataatgttgttgctgctgcttcaactgacaagagaaagcttgcagatcaagaagca
gttttgaataatgagcccacaaagaggcagcgtagatggaaaactgaaagcaatgaggtt
aaggagcctcaaatctcgaacaattcaccccgcgctgcagttaaggatgtggcacaacct
gctgttttgaaacgtaatctctctggatctaaatcagttagtggtgctgatgagccccct
aaagagcgtgaagttccaccctcgtcaaaacctgctactaattctctgaggattgatcgt
tttctgcgtccttttaccttgaaagctgtccaagaacttttgtccaaaacagggactgtc
actagtttctggatggaccacattaaaacacattgctatgtcacatattcatccattgaa
gaggcaatggaaacaaggaatgctgtgtacaacttacagtggcctccaaatggtggacgc
caactcttagctgagtttgttgatccggaggaggttaaagctcgttcagagaagccagct
ccatctccagcagctcctgtgagttctggcccggctgttgctgaactatctcctacagtg
acgcagccttcaccccgccaacaaagccttagacagcagatggcacaacaaccttctcta
ccaccgccacctcctttaacgaacccgcctcaggctagggaatgggctgttccacctcca
cccccaccaatggaaaaagtagaggctcctatagtgaccttggatgatttatttaggaaa
acaaaggcaacacctcggatctactacttgcctttgtccgatgagcaagtggctgctgta
cttgaagctcggagtagaaactctaagcagtag
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