Chenopodium quinoa (quinoa): 110683002
Help
Entry
110683002 CDS
T05764
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03030
DNA replication
cqi03420
Nucleotide excision repair
cqi03430
Mismatch repair
cqi03440
Homologous recombination
cqi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110683002
03420 Nucleotide excision repair
110683002
03430 Mismatch repair
110683002
03440 Homologous recombination
110683002
03460 Fanconi anemia pathway
110683002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqi03000
]
110683002
03032 DNA replication proteins [BR:
cqi03032
]
110683002
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110683002
Transcription factors [BR:
cqi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110683002
DNA replication proteins [BR:
cqi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110683002
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110683002
MMR (mismatch excision repair)
110683002
DSBR (double strand breaks repair)
HR (homologous recombination)
110683002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
RMI1_C
Motif
Other DBs
NCBI-GeneID:
110683002
NCBI-ProteinID:
XP_021715030
UniProt:
A0A803MG90
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MPINLTKNSLSAIMDGDINSKPLVQVLDIKPIASNQERYRFLLSDTVSTQQAMIATQLNG
RVKSGEVRKGSVIQLIEYICSAVQNRKIIVVLNMETIIPDCDIIGNPLMPSGSDFSVGNA
LPNSNVINPIGGSNTKVAAVGNSNNAQNFRPTIQPAYQPPPNYKNHGPVVKNEAPARILP
IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
YDVIEVGKVYMISKGTLKPVQKNFNHLKNEWEIFLEATSTVDLCPDEDVSIPKQQFNFRP
ISEIEGAENNSILDIIGVVISVNPSVPIMRKNGMETQRRNLNLKDMSGRSVELTLWGDFC
NREGQDLQELVDSGYFPVLAVKAAKVNDFSGKSVGTISSTQLFINPDIPEAHSLNEWFRR
GGKDCAAQSISRDVMPLGGKNEVRKTILQIKDEGLGRSEKPDWVTVKATLSFIKTDTFCY
TACPLMIGDRQCSKKVTKSGNTRWVCDRCNQEFEECDYRYLLQAQIQDHSGVTWVTAFQE
AGEEILGCSAKELYTLKSEEQDERFAEAIRSKIFVPFLFKLKVKEETYGEEQRVKTAVIR
ADRVDFAAESRFLIDMIMKHRKR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaatctgacgaagaattcgctttcagctataatggatggcgatatcaactcc
aaaccgctggttcaggtgttggacatcaagcccattgcttctaatcaggaacggtaccgt
tttctcttatccgacaccgtttcgactcagcaggcgatgattgcgactcagctcaacggc
cgtgttaagtctggtgaagttcgtaaaggttccgtcattcaattgattgaatatatttgt
agcgccgttcaaaatcgcaagattattgtcgtcctgaacatggaaactattatacctgat
tgtgatataatagggaacccactgatgccctctggatctgatttttctgttggaaatgca
ttgcctaatagtaatgttattaatcctatcggaggaagcaatacaaaagtggccgcagtt
ggtaacagtaacaatgcgcaaaatttcagaccgactattcagcctgcataccagccaccc
cctaattataaaaatcatggccctgttgtgaagaatgaggcaccagcacgtatactacca
attgctgcattaaatccttatcaggggcgttgggctattaaagcaagagtcacagctaaa
ggagatcttcgtcgttataacaatgctaaaggtgatgggaaggtgttttcctttgatctc
cttgattcagatggcggtgagattcgtgttacatgctttaatgcagttgttgaccgcttt
tatgatgttattgaggttgggaaggtttatatgatctcaaagggtaccttaaaacctgta
caaaagaacttcaatcatctgaagaatgagtgggagatttttctggaagcaacttctact
gttgatctttgcccagatgaagatgtttccatacccaaacaacagtttaacttccgacct
attagtgaaattgagggtgcagaaaacaattccattttagacattattggtgttgtaata
tcagttaatccttcagtccccattatgaggaagaatgggatggaaacacagagaagaaac
ttaaatttgaaagacatgtcaggcagaagcgttgagctaaccctatggggagacttctgc
aaccgagaaggtcaggacctgcaagaattggttgattctgggtactttcccgtcttggct
gtgaaggctgcaaaggtcaatgacttcagcggaaaatctgttggtacaatttcttcaacc
cagctttttattaaccctgacattcctgaagctcacagtttgaatgagtggtttcgtcga
gggggaaaggattgtgctgcccagtctatctctagagatgttatgcctcttggaggaaag
aatgaggttcgcaaaaccattttacagatcaaggatgaaggtcttggaaggtcagaaaag
ccggactgggttacagttaaggcaacattatcatttataaaaacagataccttttgttac
acagcctgtccattgatgattggtgatagacagtgcagtaagaaagtcacaaagtcggga
aacacaagatgggtatgtgatcgatgcaatcaagaatttgaggagtgtgattatcgctat
ttgctacaagcacaaatacaggatcattcaggagtgacctgggtaactgcttttcaagaa
gccggggaagaaatcttaggctgctctgctaaagagctgtacactttaaaatctgaagag
caggatgaaaggtttgctgaggctattcgcagtaagatctttgttccattccttttcaag
cttaaggtaaaagaggaaacttatggtgaagagcagagagtaaaaacagctgtaattaga
gctgatagagtggactttgcagctgaaagcaggtttttgattgatatgatcatgaagcac
cgcaaacgatga
DBGET
integrated database retrieval system
