Chenopodium quinoa (quinoa): 110683085
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Entry
110683085 CDS
T05764
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110683085
03083 Polycomb repressive complex
110683085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110683085
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110683085
Histone modification proteins
HAT complexes
HATB complex
110683085
HDAC complexes
Sin3A-HDAC complex
110683085
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110683085
PRC2.2
110683085
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110683085
Heterochromatin formation proteins
Other heterochromatin formation proteins
110683085
Chromatin remodeling factors
NuRD complex
110683085
NuRF complex
110683085
NuRF complex (fruit fly)
110683085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110683085
NCBI-ProteinID:
XP_021715126
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MRGKHQQSAVDEKYAQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLS
EQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELP
QHNHIVATHTDSPDVLIWDVETQPNRHAVLGATPSRPDLVLTGHKENAEFALAMCPKEPY
VLSGGKDKSVVLWSIQDHITTTSSDPSTNKPQGSGATIVKQNGESPSVGPRGIFQGHEDT
VEDVQFCPKSSQEFCSVGDDSCLILWDARTGSDPAIKVEKAHNADLHCVDWNPFDENYIL
TGSADSSVRMFDRRNLTSDGVGSPVHKFEGHKAAVLCVQWSPDNPTVFGSAAEDGVLNIW
DYEKVGKKKERGVRTPNAPPGLFFQHAGHRDKVVDFHWNTYDAWTIVSVSDDCDSSGGGG
TLQIWRMSDLIYRPEEEVLAELEEFKSHVVTCGSKS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaaacatcaacaatcagcagttgatgagaagtacgctcaatggaaatctctc
gtccctgttctctacgactggctcgctaatcacaacctcgtctggccttctctctcttgc
cggtggggcccgcagctcgagcaagctacttacaagaaccggcagcgtctctatctctct
gaacagaccgatggcagtgtgccaaatacactggtgatagcaaactgtgaaattgtaaag
ccaagagttgctgctgcagagcatatctcacagtttaatgaagaagctcgctctccattt
gtgaagaagtacaagaccattatacatcctggagaggtgaacagaatcagggaacttcct
cagcacaatcatattgttgccacccatacagatagtcctgatgttttgatttgggatgtt
gagactcaacccaatcgccatgctgtgctaggtgcaactccttctcgtccagatttggta
ttgacaggacataaagaaaatgctgagtttgctcttgcaatgtgcccaaaggaaccttat
gtgctctctggagggaaagacaagtccgtagttttgtggagcattcaggaccacataaca
acaacatcctcagacccttcaaccaacaagcctcaaggatcgggggcgacaatagtgaaa
caaaatggtgaaagcccttctgttggacctcgaggtatctttcaaggccatgaagatact
gtggaagatgtgcaattttgtccaaaaagctctcaggagttctgtagtgttggagatgac
tcttgccttatactgtgggatgctcggaccgggtctgatccagccattaaggttgagaag
gctcataatgccgatcttcactgtgttgactggaatccttttgatgaaaattacatcctc
acaggatctgctgatagctctgttcgtatgtttgaccggcgtaatcttacttctgacgga
gtaggatcacctgttcacaaatttgagggccacaaagctgcagttctttgtgtccagtgg
tctcctgacaatccaactgtctttggaagtgctgcagaggatggtgttctcaacatttgg
gactatgagaaggttggtaaaaagaaagagcgtggggtaagaacaccgaatgctcctcca
ggtctcttttttcagcatgctggacacagggataaggtggttgattttcattggaatacc
tatgatgcttggactattgtgagtgtttctgatgactgtgattctagtggcggcggtgga
actctacagatatggcgtatgagtgatctaatttaccgaccagaagaagaggttttagca
gagcttgaagaattcaagtcacatgttgttacatgtggttctaaatcatga
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integrated database retrieval system
