Chenopodium quinoa (quinoa): 110683358
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Entry
110683358 CDS
T05764
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110683358
03015 mRNA surveillance pathway
110683358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110683358
03041 Spliceosome [BR:
cqi03041
]
110683358
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110683358
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110683358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
110683358
NCBI-ProteinID:
XP_021715399
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFAPELEHLVDISKVKMDVIKPWIAKRVTELL
DGFEDEVLINFINGLLEGKVVNGKQIQIQLTGFMEKNTGKFMKELWSLLLSAQKNASGVP
QQFLDAKEEETRKKKEENDRIFNEIQRRKEKEREDSEQEKVRQMDDGLGKYSNDESSRRR
ERGSGAQSEDENGADVKNGFGGRSRASKSPSDHSQSPHRERSVSRSISGSPRPKRQSVSP
GRRHQSPRRRSVTPRRRSARESVSPRRRSLSRRRSPSRTRYRSPSPMRRRVRSPARRRSP
SPIRRMSPSPARRSPSPLRRRSRSPLRRRSPSPRRRRTPSPWRRRSPSPRRRRSPSPVRR
RRRRSSSSPRSRSPGLRRSPSPIRRRFQSPVRRPFPVRRRSPSPARRRSPSPARRRSPSP
ARRRSPMARGHRSPSPVEHRSLAPVRRKSPVPARSRSPTPSPSRSPSPASQSSGSPVRHI
SASPVKTRSPRIQNSPHGSPRDQNSDHEPAMMARRQPISLSPQRDNRKRSPRNVASVSPS
PEKSNAASPLSRKKSSGEDKRLASPYDSPEKKSGDKTTINGNRSPSRLRGHKVRHGSLEM
RGDKFDNDREYQADKYKSEEKKSGRSSVGNQRDSPDRSVRYQHRGNVDARQDDEIISEEA
SLKEVRALKKSPPRGTVSDERSDILYPGDVFKLDEKRNYQQKDTRDNTVSDSVVKLQNKR
RSPSVDSESGSEESEKHRAEVSEKRKHRRSRRREVASDDTSSESEMEDRKEAKRRKKEEK
KIRKEERRRRREERRRRKEEKRAGKRKRKSKDADALSSDVENNEKDTNAANGERRTTKYS
SDEEETESQKKRLEIELREKALESLRAKKGISR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggtacgtcggctgagcaagacactcggttctcaaataag
caagcaaagttgctcaaaacgcagaagtttgctccagaactcgaacatttggttgatatt
tcaaaggtgaaaatggatgttatcaagccgtggatcgcgaaaagagtgactgaactcctt
gatggatttgaagatgaagtgctcattaactttatcaatggacttcttgaaggaaaggtt
gttaatggaaagcagatccaaattcagctgactggtttcatggaaaagaatactggtaag
ttcatgaaagagctttggtcgcttcttctcagtgcgcagaaaaatgctagtggcgtaccc
caacaattcctggatgctaaggaagaggaaactaggaagaaaaaggaggagaacgatcgt
atctttaatgaaatccagagaaggaaagagaaggaaagagaagattctgagcaagagaaa
gtgaggcaaatggatgacgggcttggaaaatattctaatgacgaatcaagtcgaagacga
gaaagaggttctggtgcgcaatctgaagatgagaatggagctgacgtgaaaaatggtttt
ggaggaagatccagagcatccaagtcaccatctgatcattctcaatcacctcatcgagaa
agaagtgtatcaaggagtatttctggctctcctaggccaaaaaggcaatcggtttctcct
ggaagaagacatcaatcgccccgaagaagatctgtcacacctaggaggcggtctgcccgg
gagtcagtgtctccaaggcggaggtctctttccagaaggcggtctccatctcgtacacgt
tataggtctccatctcctatgaggcgccgggtccgttctccagcacgtagaaggtcacca
tctccaattcgacgcatgtcaccttctcctgccagaagatcaccatctcctttaagacga
cggtctcgctcacctttgcgacggcggtctccttctcctaggaggcgtaggacaccttct
ccgtggcgtcgacgatcaccatcccctaggcgacgcagatccccttctcctgttcgtcgc
cgtaggagaaggtcctcttcaagtccgaggtctcggtctccaggtctgcgtaggtctccg
tctcctatacgacgtaggttccaatcccctgtcagaaggccttttcctgtccgacgtagg
tctccgtctcctgcacggcgtaggtctccgtctcctgcacgacgcaggtctccgtctcct
gctcgacgtaggtcccccatggcaaggggacaccgttctccatctccagtggaacataga
tctttagctccagttcggagaaagtcacctgttccagctcgtagtcgatcacctactcca
tcacctagcagatctccgtcacctgccagtcaaagttccggatcacctgtcaggcatatt
tctgcttcaccagttaagacaagatcacccaggattcagaattccccacatggatcccct
agagatcaaaacagtgaccacgagcctgcaatgatggctcgtagacagcctatttcattg
tccccccaaagagataatcgaaagcgttcacccagaaatgttgcgtctgtctcaccttct
ccagagaagtcaaatgcggcctcaccactatcccgcaaaaagagttctggtgaagataag
aggctggcaagtccatatgacagtcctgaaaaaaaatcaggggataaaacgaccattaat
ggaaatcggagtcctagtagattgagaggccacaaagttcgtcatggaagcctagaaatg
agaggagataaatttgataatgatagggagtatcaggcggacaagtacaagtcagaagaa
aaaaaatcaggacgctcatcagttggcaatcagagggattctcctgatcgatcagttaga
taccaacatcgtggtaatgttgatgcacgacaggatgatgagataataagtgaagaagct
tctttgaaggaagttcgtgctctgaaaaagtcaccacctagaggtactgtatcagatgag
aggtctgacatattgtaccctggggatgttttcaagttggatgaaaagaggaactaccaa
cagaaagatactagggacaacactgtgtctgactccgtagtgaaattacaaaataaacga
agaagtcctagtgttgactctgaatctggatctgaggaaagtgagaagcatagagctgaa
gtttctgagaagaggaagcatcgaaggtcaaggcgaagagaagtggcatctgatgatact
agttctgaatctgagatggaggatagaaaagaagctaagagaagaaagaaagaagagaag
aaaataagaaaagaggagcgacgtaggcgtcgtgaggagcggcgccggaggaaggaagag
aagcgtgctggtaaacggaagcgaaagtcaaaagatgctgatgccctgtcttctgatgtg
gaaaacaatgaaaaggataccaatgctgcaaatggtgaacgtcgtacaacaaagtattca
agtgatgaagaagagacagaatcacaaaagaagaggcttgagattgagctacgtgaaaag
gctcttgaatcactaagagcaaagaaggggattagccgttga
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