Chenopodium quinoa (quinoa): 110683520
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Entry
110683520 CDS
T05764
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110683520
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110683520
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110683520
NCBI-ProteinID:
XP_021715603
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All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MASKFVTLLIFSFLLAMVPKTCLGKKSGLATFNAIDVCWRRNPNWINSREDIAKCSAGFA
GKMFNNIGKDVNKYVVTDPSDNAMSPKPGTLRYGVTMVPGKVWISFQKDMEIKLERTLVV
GSYTTIDGRGAIVHITNGCLMLYKVTNVIIHGLRIHHCRSQPAGSVMGPGAKLLPMSKMD
GDAIRMLGSTKVWIDHNTLYRSEDGLIDVTLGSTNITISNNWFRDHNKVMLLGHDDDFKD
DKNMKVTVVYNRFGPNCHQRMPRVRHGYAHVANNLYLGWEVYAIGGSMSPSIKSESNLFV
APNSGTKQVLMDMNDKSTGKGIWNFKSVGDVLENGASFNETGSGFVKPNYNNEERFPVES
GRIVRQLTRSAGALRCQGGSIC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaatttgtaactttgcttattttctcttttttactagccatggtaccaaaa
acatgtttgggtaagaaatccggccttgcaacgtttaatgccattgatgtttgttggcga
cgaaaccctaattggattaatagtagggaagatattgcaaaatgctcagcgggttttgca
ggtaaaatgtttaacaacattggcaaagatgtgaacaaatatgtagtcactgatcctagt
gataatgcaatgagcccgaaaccgggaactcttaggtatggagtgactatggtaccgggg
aaagtatggatctcatttcaaaaagacatggagattaaacttgaaaggactcttgttgtt
ggtagttatacaaccattgatggtcgaggtgctatcgttcatattactaatggatgcctc
atgctatacaaggttactaatgtgatcatccacgggttgcgaattcaccattgtcgatcc
caaccagcaggctcggttatgggacctggtgcaaagttgttgccaatgagcaaaatggac
ggtgatgccataagaatgcttggctcaacaaaggtgtggatagaccacaataccctctac
aggagcgaagatggcctcatcgatgtaacccttggctcaaccaacattaccatctccaac
aactggtttcgcgaccacaacaaggtcatgctactaggccatgatgatgatttcaaggac
gacaagaacatgaaggtcacggtagtctacaaccgatttggccctaactgccaccagcgt
atgccaagagttcgtcatggttatgctcatgtagctaacaacttatatctaggatgggaa
gtttacgccattggaggaagcatgagccctagcataaagagcgagtctaacctctttgtc
gcgcctaactctggaacgaaacaggttttaatggacatgaatgacaagagtactggaaaa
gggatatggaactttaaatcggtgggagatgtcttagaaaatggagcttctttcaacgaa
accggttctggttttgtaaaaccaaactacaacaatgaagaaagatttcccgtcgaaagt
ggtaggattgtaaggcaacttacaagatcagctggggctctacgttgccaaggaggatca
atctgctaa
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