KEGG   Chenopodium quinoa (quinoa): 110684100
Entry
110684100         CDS       T05764                                 
Name
(RefSeq) THO complex subunit 4B-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03013  Nucleocytoplasmic transport
cqi03015  mRNA surveillance pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110684100
  09122 Translation
   03013 Nucleocytoplasmic transport
    110684100
   03015 mRNA surveillance pathway
    110684100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110684100
   03041 Spliceosome [BR:cqi03041]
    110684100
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110684100
    TREX complex
     110684100
Spliceosome [BR:cqi03041]
 Complex C
  Other components
   EJC/TREX
    110684100
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110684100
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 110684100
NCBI-ProteinID: XP_021716197
LinkDB
Position
Unknown
AA seq 259 aa
MAMENRLNMSLDDLIKINKSSSGRGGGGGGGRGRGGGGGRGYSGPGPSRRFNNRVANRST
PYSMPMSKAPDSFWQHDMFGNQGGIGVVGGGGGASSIETGTKLYISNLDYGVSNDDIKEL
FSEVGDLKRYAVHYDRSGRSKGTAEVVFSRRGDGLAAVKRYNNVELDGKPMKIEIVGTNV
AAMGALPPVFNGLVRNPPGPRSGQGRGGAMGRIRGGRGSGSGSGRGRGRGRGRDEKASVS
VDDLDADLDKYHSEAMQTN
NT seq 780 nt   +upstreamnt  +downstreamnt
atggctatggaaaatcggttaaacatgtctctcgacgatctcatcaagatcaacaaatct
tcttccggccgtggcggcggcggcggcggcggtagaggcagaggtggaggcggtggtaga
ggttattccggccccggaccttctcgaagatttaataatcgcgttgccaatcgttctacc
ccttattctatgcctatgtccaaggcacctgattctttttggcagcatgatatgtttggt
aatcaaggtggtattggtgttgttggtggtggtggtggagcgtcttcaattgagactgga
actaagctttatatctctaatttggattacggtgtttctaatgacgacatcaaggagctc
ttttctgaggttggtgacctgaaacgttacgctgttcattacgataggagtgggagatcg
aagggaactgctgaagttgtattttcacgaagaggagatggtctggctgctgtcaagagg
tataataacgtagaacttgatggtaaaccaatgaaaatcgagatcgtggggacaaatgtt
gcggctatgggagctttacctccagtttttaatggccttgttaggaatccacctggtcct
agaagtggacaaggaagaggtggtgcaatgggacgcattcgtggtggccgtggttctggt
tccggttctggcagaggacgtggcaggggaagaggccgtgatgaaaaggcatcagtatct
gtagatgacctggatgccgacttggacaagtatcactcagaagcaatgcagactaactaa

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