Chenopodium quinoa (quinoa): 110684100
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Entry
110684100 CDS
T05764
Name
(RefSeq) THO complex subunit 4B-like isoform X1
KO
K12881
THO complex subunit 4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110684100
09122 Translation
03013 Nucleocytoplasmic transport
110684100
03015 mRNA surveillance pathway
110684100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110684100
03041 Spliceosome [BR:
cqi03041
]
110684100
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110684100
TREX complex
110684100
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110684100
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110684100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
110684100
NCBI-ProteinID:
XP_021716197
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MAMENRLNMSLDDLIKINKSSSGRGGGGGGGRGRGGGGGRGYSGPGPSRRFNNRVANRST
PYSMPMSKAPDSFWQHDMFGNQGGIGVVGGGGGASSIETGTKLYISNLDYGVSNDDIKEL
FSEVGDLKRYAVHYDRSGRSKGTAEVVFSRRGDGLAAVKRYNNVELDGKPMKIEIVGTNV
AAMGALPPVFNGLVRNPPGPRSGQGRGGAMGRIRGGRGSGSGSGRGRGRGRGRDEKASVS
VDDLDADLDKYHSEAMQTN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaaaatcggttaaacatgtctctcgacgatctcatcaagatcaacaaatct
tcttccggccgtggcggcggcggcggcggcggtagaggcagaggtggaggcggtggtaga
ggttattccggccccggaccttctcgaagatttaataatcgcgttgccaatcgttctacc
ccttattctatgcctatgtccaaggcacctgattctttttggcagcatgatatgtttggt
aatcaaggtggtattggtgttgttggtggtggtggtggagcgtcttcaattgagactgga
actaagctttatatctctaatttggattacggtgtttctaatgacgacatcaaggagctc
ttttctgaggttggtgacctgaaacgttacgctgttcattacgataggagtgggagatcg
aagggaactgctgaagttgtattttcacgaagaggagatggtctggctgctgtcaagagg
tataataacgtagaacttgatggtaaaccaatgaaaatcgagatcgtggggacaaatgtt
gcggctatgggagctttacctccagtttttaatggccttgttaggaatccacctggtcct
agaagtggacaaggaagaggtggtgcaatgggacgcattcgtggtggccgtggttctggt
tccggttctggcagaggacgtggcaggggaagaggccgtgatgaaaaggcatcagtatct
gtagatgacctggatgccgacttggacaagtatcactcagaagcaatgcagactaactaa
DBGET
integrated database retrieval system