Chenopodium quinoa (quinoa): 110684194
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Entry
110684194 CDS
T05764
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110684194
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110684194
Complex C
U4/U6.U5 tri-SnRNP related factors
110684194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
Serglycin
Motif
Other DBs
NCBI-GeneID:
110684194
NCBI-ProteinID:
XP_021716300
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MKSELFSAHVRHVSENDGGDKYRERRRGSERRERGQEQPRRWMEEEGDGNRKRRDERESN
EFGGSDSENSDKERDRKRSERREEPKRRVEEDGDGNRKRRDERNRNGRGGSDLESFDEDR
DRKRSERREEPKRRVEEDGDGVRKRRDERNRNGRGGSDLESFDEDRDRKRSERQEQEQDR
PSRRVEEDGDGDRKRRDGRERSGHGGSDSEGSDKEQDRKRSERREREQPRKRSDVEEDGD
EEIIKERDSREKNRSLENDSESSGDERNWKRSVKREQEKPRKRLDNDEAGDGKRSDDNGR
QENDSGNSDEERDRKKSEKREKEQHRKRLDDKEKDDKEIVIQGRHGRRKNERSSRIGRQG
SDSESSGGDRRRDGERRRRERERRRHRYDSDDSSDSDGRRKRHSMRRSDRREDRTSKQTH
DFEEGEIRSRKERNEKVFESKQDGRNVIGEEPAKPQTQSTAANMNPGGDLSTLGRTGGVY
IPPFKLARMMKEIEDKSSVEYQRLTWDALRKSINGLVNKVNAINIKNIIPELLGENLIRG
RGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEIGDLLLRRIILQLKRAYKRNDKPQL
MAAVKFIAHLVNQQVAHELVALELLTILLEQPTDDSVEVAVDFVKECGSILQDLCPKGLH
GIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVDPEDQLTHEMSLE
DEIDPETGLDIFKQDPNFVENEKKYEELKKSILGDESEDDDGSDAGSDDDEDDEEEDEDE
EEQQMQIKDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELNIMLLECC
SQERTYLRYYGLLGQRFCMLNKVYQENFDRCFVQQYSMIHRLETNKLRNVAKFFAHLLGT
DALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPAMQDSFDSIFP
KDNPRNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQNPEPEVPEDESDSGSGSDS
GSGSGSSSSSSGSESSSAESDSSSDASSSSSDDDRRNKRKKNDSGGGRYRKRRKGD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagagctgttttccgctcatgttaggcatgtcagtgagaatgatgggggagat
aagtatagggagaggaggagaggaagtgagaggcgagagcgggggcaggagcaaccgcgg
agatggatggaggaggaaggagatgggaacaggaagagacgggatgaaagagaaagtaat
gaatttggagggagtgattcagagaattctgataaagagcgggataggaagagaagtgag
aggcgagaggaaccgaagagaagggtggaggaggatggagatggaaataggaagagaaga
gatgaaagaaataggaatggacgtggagggagtgatttagagagctttgatgaagatagg
gataggaagagaagtgagaggcgagaggaaccgaagaggagggtggaggaggatggagat
ggagtcagaaagagaagagatgaaagaaataggaatggacgtggagggagtgatttagag
agctttgatgaagatagggataggaagagaagtgagaggcaagagcaggagcaggatcga
cccagcagaagggtggaggaggatggagatggagataggaagagaagggatggaagagaa
aggagtgggcatggagggagtgattcagagggttctgataaagagcaagataggaagaga
agtgagaggcgagagagggagcaacctaggaagagatccgatgtggaagaagatggtgac
gaggagattataaaggaaagagatagcagggagaagaataggagcctagagaatgattca
gaaagttctggtgacgagaggaattggaagagaagtgtgaaacgagagcaagagaagcct
aggaaaaggttggataatgatgaagctggtgatgggaagagaagtgatgataatggacgt
caagagaatgattcagggaattctgacgaagagagggataggaagaaaagtgagaaacga
gaaaaggagcaacataggaagaggttggatgacaaagaaaaagatgacaaggaaatagtc
attcaaggcaggcatggtagaagaaagaatgaaagaagcagcaggattgggcgtcaaggg
agtgactcagaaagctctggtggggatagacgacgggatggggagagacgcagacgtgaa
agagagaggagaaggcaccgatatgactcggatgattcttcggattctgatgggcgtaga
aagaggcatagcatgcggaggagtgatcgaagagaggataggactagcaaacaaacccat
gattttgaggaaggggaaataagatctaggaaggaaaggaatgagaaagtgtttgagtca
aagcaagacggcaggaatgtgattggagaagagcctgcaaaaccacaaacacagtctact
gcagcaaatatgaatccaggtggtgatcttagtacccttggcaggactggaggagtttac
atcccaccatttaagttggctcgaatgatgaaggaaattgaggacaaaagcagtgtggaa
tatcagcgtttgacatgggatgcccttaggaagagtatcaatggtttggtaaacaaagtg
aatgccattaatatcaagaacattattccagaattgcttggtgagaatctgatcagggga
aggggactgttttgtcgatcatgcatgaagtcccaaatggcatcacctggttttactgat
gtatttgctgctctggttgctgtggtcaataccaagttccctgaaatcggggatcttctt
ttaaggaggattattctacagctaaagagagcttacaagcgtaatgataagcctcaactg
atggctgctgttaaattcatagctcatcttgtgaaccagcaagttgctcatgagcttgtt
gctttggaattgctcaccattctgttggagcagcctactgatgatagtgttgaggttgca
gttgattttgtcaaagaatgtggctccattcttcaagacctttgtcccaagggtcttcat
ggtatttttgaacgttttcgaggaattcttcatgaaggagagattgacaaaagggttcag
tttctgattgaaggcctatttgccattagaaaggctaaattccaggggcatccagctgtg
cggccggaactggatcttgtggacccagaagatcagcttactcatgagatgtcactggaa
gacgaaatagatcctgagactggtcttgacattttcaaacaagaccctaatttcgtggaa
aatgagaaaaagtacgaagagttgaagaaatccatactaggagatgagtcagaggacgat
gatggatctgatgctgggtctgatgatgacgaggacgatgaagaagaggatgaagacgaa
gaagagcagcagatgcagataaaagatgaaaccgaaaccaaccttataaatcttcgaaga
actatatatttaacaataatgtccagtgtagattttgaagaagctggccacaagctgtta
aaaatcaaacttgagcctgggcaagagatggagttgaatataatgttactggagtgctgc
agccaagagaggacatatctcagatattatggtcttttgggccaacggttttgtatgctt
aacaaagtgtatcaggaaaattttgacagatgctttgttcagcaatactccatgatacat
cgacttgagacaaacaaattacgtaatgtggccaaattctttgctcatttgctgggcact
gatgctcttccttggcatgttttagcttacattcgtctgactgaagaggacacaacttct
tcatctcgtatcttcatcaaaatccttttccaggaattgtctgagcaccttggtatccgg
ttactcaatgaacggctaaatgacccagcaatgcaggactcctttgattcaattttccct
aaagataatcccagaaacacacgttttgcaatcaacttcttcacatccattgggcttgga
ggaataacagagaacttgagagagtacctgaagaacatgccacgattgataatgcaacaa
cagaatccagagccggaagtgccagaagatgaatctgattctggttctggttccgattcc
ggttctggttcaggttcaagttcaagttcatcaggctcggagtcgtcctctgctgaatct
gattctagctccgacgcaagttcatcaagctcagacgatgataggcgtaataaaaggaag
aagaatgacagtggtggtggtagatataggaaacggaggaagggagactag
DBGET
integrated database retrieval system
