Chenopodium quinoa (quinoa): 110684206
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Entry
110684206 CDS
T05764
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cqi03016
]
110684206
Enzymes [BR:
cqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110684206
Transfer RNA biogenesis [BR:
cqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110684206
Prokaryotic type
110684206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
110684206
NCBI-ProteinID:
XP_021716314
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAVWSLRLPLTTSWRNGRLKPLSYPWNFSLSNHNIHLLAHFSATSSSPSLSASTQTQEPQ
IKPQISQTHESIASPSKWESFRKKKVVMRVGYVGSNYKGLQKQREDNIPTIEEALENALY
KVGGINETNYGNLHKIAWARSSRTDKGVHSLATTISLKLEIPDYAWMNDPNGLVLADHVN
SHLPEDIRVFSILPSQRSFDPRRECHVRNYSYLLPAEVIGITSDSSSAEIDCHIKDFNEI
LNIFEGEYPFHNYTARSKYRRKPLKGLANRRYKVSDKPPLLEVEENNADCQNSVDNEDAL
CDEELITNMPDDGDVDALFDSEDGHGDESEKNDSTVVIKARWLHERDEADKLSSAHWRKI
FQCSCGKLERSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILKLSLNKFSR
IVLPLAPSEVLVLRGNDFRLRKQPGNKKRPEMRILVNSEEIKNVVDKFYVTVLLPQVAKF
LDPHESPWKEWLEILDVNASIPESELEEVRNAWNVWNEEFQNRLNRIVSLEKTGALDE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttggtctctgcgtcttccattaacaacttcatggagaaatggcagacttaaa
cccttgtcatatccatggaatttctctctctccaaccataatattcatctacttgctcat
ttctctgctacttcatcatcaccttcactttctgcttctactcaaacccaagaacctcaa
attaaaccccagatttctcaaactcatgaatcaattgcttcaccttcgaaatgggagtca
ttccggaagaagaaagtggtcatgcgagttgggtatgttggttccaactacaaaggtttg
cagaagcaacgagaagataatattcccaccattgaagaagctttggaaaatgctctttac
aaagtaggtggcatcaatgaaaccaattatggtaacttacataagattgcctgggccagg
agtagccgaactgataaaggagttcattcactggccacgacgatatctttgaaattggag
attcctgattatgcgtggatgaatgaccctaatggtctcgttcttgcagaccatgttaac
tctcatctccctgaggatataagagtgtttagtattttaccttctcaaaggagctttgat
cctcgacgggaatgtcatgtccgaaattattcctaccttcttccagctgaagtcattgga
ataacaagtgactcctcttctgctgaaattgactgtcatataaaagacttcaatgaaatt
ctaaatatttttgagggagaatacccttttcataattatacagccaggtctaaatatcga
cgaaagccactaaaaggacttgcaaatagaagatataaagtatctgataagcctcccctt
ttggaggttgaggaaaacaatgctgattgtcagaactcagttgataatgaagatgcattg
tgtgatgaagaacttatcactaatatgccagatgacggtgatgttgatgcgttgtttgac
tctgaagatggccatggtgatgagtcagaaaagaatgattctacagtagttattaaggct
cgatggcttcatgaacgtgatgaggcggacaagctcagttctgctcattggaggaagata
tttcagtgttcttgtggcaagttggagaggtcacttgagatgggttttgtcgagctctca
atatgcggggagtctttcatgctgcatcaaatccgcaaaatggttggcactgctatagca
gttaagcgtggattgttccccagagatattctcaaactatcactcaacaagttctcaaga
attgtcctacctcttgctccatcagaagttttagttttgagaggaaatgactttagattg
aggaaacagcctgggaataagaaaaggccagagatgcgtatattagttaattctgaagag
ataaaaaatgtagtagataagttctatgtaactgtactgctacctcaagttgctaagttt
ttggatcctcatgagtctccctggaaggaatggcttgagattttggatgtgaatgcaagt
atacctgaatcagagttggaggaagtcagaaatgcctggaatgtgtggaatgaagagttt
caaaacaggttaaacaggatagtttctttagagaaaactggagcattagatgaatga
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