Chenopodium quinoa (quinoa): 110684303
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Entry
110684303 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110684303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110684303
03009 Ribosome biogenesis [BR:
cqi03009
]
110684303
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110684303
Spliceosome [BR:
cqi03041
]
Complex A
U1 snRNP components
U1 related factors
110684303
Complex B
110684303
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110684303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
110684303
NCBI-ProteinID:
XP_021716433
UniProt:
A0A803LD76
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSRYDSRSTDPTSYRDRRSDYGSSTGGEYGRSGAPSSPQRKLDLDGLTPFEKNFYVESSS
VAAMTDSEVEEYRKLREITVEGRDVPKPIKHFSDIGFPDYVMEEVKKAGFTEPTAIQAQG
WPMALKGRDLIGLAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQ
QEATKFGTSSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVTY
LVLDEADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPKEVEQLARKFLHDAYKVIIGS
LDLKANHAIRQIVEIVSENQKYKKLVDLLEDIMDGSRILVFMDTKKGCDQITRQLRMDGW
PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV
HRIGRTGRAGAKGTAYSFFTAANARFAKELIAILEEAGQKVNPELAAMGKGAPPPLAGGI
PERRSRYSTGRSWS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttacgattctcgctctactgaccctacttcctaccgcgaccgccgcagtgat
tacggaagttcaaccggcggcgaatatggtcggagtggggcgccctcctcgccgcagcgg
aagctggatttggatgggttgacgccttttgagaagaatttctatgtggagtcttcgtct
gtcgccgccatgactgatagcgaggttgaagagtatcgcaaacttagggagattactgtc
gagggtcgtgatgttcccaaacctatcaaacatttctccgatatcggtttcccagattat
gtcatggaagaggttaagaaagctggctttactgaacccactgctattcaagctcaagga
tggccaatggccctaaagggtcgtgatcttattggtcttgctgaaacaggatcagggaaa
acacttgcctacttgctacctgctattgtacatgtcaatgctcagccaattttatctccc
ggtgatggtccaattgtgttagttctggctccaactagggaacttgctgtacaaatacaa
caagaagccactaagtttggcacttcatcaaggattaaaaatacctgcatatatggcggg
gttcctaagggacctcaagttcgtgatctccagaaaggtgtcgagatagtaattgcaaca
cctggaaggttgattgatatgttggaatctaaccatacaaatctgcgtagggtgacgtac
cttgtattggatgaggcagatcgaatgcttgacatgggctttgaaccccagattcgcaaa
attgttactcagatccgacctgaccgtcaaacgctatactggagtgccacttggccaaag
gaggttgaacaattagctaggaagtttctgcatgatgcatacaaggtgatcattggctct
ctagacttaaaggctaatcatgctattcgtcagatcgtggagatcgtctctgagaatcag
aagtataagaaactagtggatctcctggaggacataatggatggaagccggatattggta
tttatggacactaagaagggctgtgatcagattacacggcagcttcgtatggatggctgg
cctgctctttcgattcacggggataagagccaagcagaaagggattgggtgctctcagag
tttaaatctggcaagagtcctataatgactgctacagatgttgcggctcgtggtcttgat
gtgaaagacgtgaaatatgtgatcaactatgatttccctggttcacttgaagactatgtt
caccgtattggtagaacagggagggctggggccaaaggaacagcatactctttttttaca
gcagcaaatgcccgatttgcgaaggaacttattgccattctcgaggaagctggacagaaa
gtcaatcctgagcttgctgctatgggcaaaggagctccacctcctttagctggtggtatc
ccagaacgaaggagccgttacagtactggtcggtcttggagctaa
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