Chenopodium quinoa (quinoa): 110684309
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Entry
110684309 CDS
T05764
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110684309
03083 Polycomb repressive complex
110684309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110684309
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110684309
Histone modification proteins
HAT complexes
HATB complex
110684309
HDAC complexes
Sin3A-HDAC complex
110684309
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110684309
PRC2.2
110684309
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110684309
Heterochromatin formation proteins
Other heterochromatin formation proteins
110684309
Chromatin remodeling factors
NuRD complex
110684309
NuRF complex
110684309
NuRF complex (fruit fly)
110684309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
eIF2A
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
110684309
NCBI-ProteinID:
XP_021716439
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MTEKGKGGRVGKGVELTVDEKYTQWKSLVPILYDWLANHNLVWPSLSCRWGPLLEQATYK
NRQRLYLSEQTDGSVPNTLVIANVEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGE
VNRIRELPQNSNIVATHTDSPDVLIWDVENQPSRHAILGAPSSRPDLILTGHQENAEFAL
AMCSCEPMVLSGGKDKLVVLWNINDHISTLATEPGAAKSASAGSNIKSASKTGDGNNGNA
ASPSVEARGIYKGHDDTVEDVQFCPTSAQQFCSVGDDSCLILWDSRAGLTPATKVEKAHD
ADLHCVDWNPHDENFILTGSADNSIHMFDRRNISAGGVGSPVHKFQGHNDPVLCVQWSPH
NRSVFGSAAEDGLLNIWDYEKIGKMQTDSGNKTSEYPAGLFFRHAGHRDKVVDFHWNSID
PWTIVSVSDDCSSSAGGGTLQMWRIIDLLYRPEDEVLAELDKFRSHVTTCSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaaggtaaaggaggaagggttggaaagggagtagagttaacagtggacgag
aagtacacccagtggaaatctttggtacccattctctacgattggctcgctaaccacaat
cttgtttggccttctctttcttgccgatggggtccacttcttgagcaagccacctacaag
aatcggcagcgtctttatctctctgaacagactgatgggagtgttcctaatacacttgtt
attgcaaacgttgaagtggttaagcctagagttgctgctgcagagcatatatctcagttt
aatgaagaggctcgctctccgtttgtaaagaagttcaaaaccatcatacatcctggggag
gtgaacaggatcagagaactcccgcagaacagtaacatagtggctacacacactgacagc
cctgacgtattaatttgggatgtggaaaatcaacctagtcgtcatgcaattctaggagct
cccagctctcgtcccgatctgatattgactggacaccaggaaaatgctgaatttgctctt
gcaatgtgctcttgtgaaccaatggtgctttcaggagggaaggataaattagtggttttg
tggaatataaatgatcatatctcaacgctggcaacagaaccaggggccgcaaaatctgct
tctgctggcagcaatataaaatcagcatctaagactggcgatggaaataatggaaatgca
gctagtccttccgtggaagcacggggcatttataagggacatgatgatactgtagaggat
gtgcaattttgtcccactagtgctcagcagttttgcagtgttggtgatgattcttgctta
atactatgggattcaagagctggattgactccagctactaaggttgaaaaggcccatgat
gctgatttgcattgtgttgactggaatcctcatgatgaaaatttcattttgactggatca
gctgataattctatccacatgtttgatcggagaaatatctctgcggggggagttggatca
cctgtccataaattccagggccacaacgatcctgtcctttgtgtacagtggtcaccacac
aatagatcagtttttggcagtgctgctgaggatggcctgttgaacatatgggattatgaa
aagattggtaaaatgcaaacagatagtggaaacaaaacatcggagtatccagcaggtttg
tttttcaggcatgcaggacacagggacaaagtggttgacttccactggaattcgattgat
ccatggactattgtcagtgtttcggatgattgttcaagctctgctggaggtggaacattg
cagatgtggcgcattattgatttgctttaccgaccagaagatgaagtcctagcagagttg
gacaaattccgatcccatgtaaccacatgctcctcctag
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