Chenopodium quinoa (quinoa): 110684336
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Entry
110684336 CDS
T05764
Name
(RefSeq) protein STABILIZED1-like isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110684336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110684336
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110684336
Complex C
U5 SnRNP specific factors
110684336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
TPR_16
TPR_17
TPR_8
TPR_2
Suf
ubiquitin
Motif
Other DBs
NCBI-GeneID:
110684336
NCBI-ProteinID:
XP_021716471
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MVNLITFDRNILVLDMNPKLTTLGNLHDTITDKLGIPSENQFLLSSSKRVIGNVDCVIAD
LGIRSNSTLMLYIPFYGGMQPPVQSKGKLEFLNAKPPPNYVAGLGRGATGFTTRSEIGPA
RAAPDLPDRSATMIGSAAIPTMGRGLGKGAGEEEEEEEGEGKGYDENQKFDEFEGNDVGL
LALAEYDEDDKEADAVWEEIDKRMDSRRKDRREARLKEEIENYNALNPKITEQFGDLKRK
LHNLSAEEWDSLPEIGDYSLRNKKRRFESFVPVPDTLLEKARQEQKHVTALDPKSRPAGG
TETPWGQTRVTDLTAVGEGRGTVLSLKLDRLSDSVTGQTVVDPKGYLTDLKSMKITSDAE
ISDIKKARLLLKSIIQTNPKHPPGWIAAARLEEVAGKIQTARQFIKKGCEECPKNEDVWL
EACRLVSPDEAKAVIARGVKAITNSVKLWLQAAKLEQDDISKIRVLTKGLQHIPKSVRLW
KAVVELANEDEAKLFLQKAVKSCPLHVELWLALARLETYERAKKVLNRAREKLPKEPAIW
ITAAKLEEANGNTAMVEKIIERGIRALQRDGVVVDREAWMREAEASERAGSVVTCLAIIK
HTVGVRVEEEDRKRTWVADAEECKKRGYVETARAIYSHALSVFLTKKSIWLKAAQLEKSH
GTRESLDALLRRAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIRLA
AFKLEFENHEPERAKMLLAKAREKGGTERDWMKSAIVERELGNVSEEKKLLDEGLQRFPS
FFKLWLMLGQIHERSGEQAKAKKVYESGLKNCPHCISLWLSLANIEEKMIGLSKARAVFT
MARKKNPRSPELWLAAVRAELWHGNKKEGDNLLAKALQECPNSGILWAAQIENVPHPQRK
SKSSDAITKCDQDPHVIAAVAKLFWHDRKVDKARDQLNRAVTLAPDIGDFWALYYKFELQ
HGNEDIQKEVLKRCVTAEPKHGEKWQAISKAVEDAHQPTEAILK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggttaatctcataacatttgataggaatatcctagttcttgatatgaaccctaaatta
acaaccttaggcaatcttcatgatactattactgataaattaggaattcctagtgaaaac
caatttttattatcatcatcgaaaagggtaattggtaatgttgattgtgtaattgctgat
ttgggaattcgatcgaattcgactttaatgctgtatatccctttttatggtggtatgcaa
cctcctgtgcagtcaaaggggaagcttgaattcttgaatgcaaagcccccaccgaattat
gttgccgggttgggtcgtggggctaccgggtttacgacccggtctgaaattgggcctgcc
cgagcagccccggacttgcctgaccgttccgctactatgattggtagtgctgcgatccct
actatgggccgtgggctggggaagggtgctggcgaggaggaggaagaggaggaaggagag
ggaaaagggtatgatgagaatcaaaagtttgatgagtttgaagggaatgatgttggattg
ttagcgctggcagagtatgatgaggatgataaggaggcggatgctgtgtgggaggagatt
gataagagaatggactcgaggaggaaggataggagggaggctaggctgaaggaggagatt
gaaaactataatgcattaaatcccaaaattactgagcagtttggagacttgaaaaggaag
ctgcataatttgtctgcagaggagtgggatagtctcccggagattggagattattctttg
aggaataagaagaggaggtttgagagttttgtgcctgtgcctgatactcttcttgagaag
gctagacaggagcaaaagcatgttacagcccttgatccaaagagtagacctgctggtgga
acggagacgccttggggacagactcgtgttactgatttaactgctgttggtgaggggagg
ggtactgtgttgtcactaaagcttgataggttatctgattctgttacagggcagactgtt
gttgacccgaaaggttatttaactgatcttaaaagtatgaagattacaagtgatgcagaa
atttcagatattaagaaggctaggttgctgttgaaatctattatacaaaccaatccaaag
caccctcctggttggattgcagctgcaaggctagaggaggttgctggcaagatccagact
gctagacagtttatcaagaagggttgtgaggagtgtcccaagaacgaggatgtgtggctt
gaggcatgtcgtttggtgagccctgatgaagccaaggctgtgatagctaggggagttaaa
gcaattactaattctgtgaagttgtggcttcaggctgctaaattggagcaagatgatata
agtaagatcagggtgctgacaaaggggcttcaacatattccaaagtcagtgagactttgg
aaggcagttgttgagcttgctaatgaggatgaggctaagctatttcttcagaaggctgta
aagagctgtcctttgcatgttgaattgtggcttgctcttgctaggctggaaacatatgag
agggcaaagaaagtgcttaacagggccagagaaaagctcccaaaggaaccagctatctgg
attactgctgcaaagttggaagaagctaatggaaatactgcgatggttgagaagatcata
gagaggggtatcagggccctacaaagagatggagttgttgttgatagagaagcttggatg
agagaagcagaggcctccgagcgtgctgggtctgtagttacttgcctagctattattaag
cacactgtcggtgtcagggtagaggaagaagataggaagagaacatgggtggctgatgct
gaagagtgcaagaagagagggtatgttgaaactgcaagggctatatattctcatgctctg
tctgtctttttgacaaagaagagtatatggcttaaagcagcacaattggagaagagtcat
ggaacaagggaatctcttgatgccttgttgcggagggcagtcacatatgtgccccaggcc
gaagttctctggcttatgggtgcaaaagagaaatggcttgctggtgatgtgcctgctgct
cgagccattcttcaggaagcttatgctgctattccaaattctgaagagattaggcttgct
gcttttaagcttgaatttgaaaaccatgaacctgaaagggcaaaaatgctacttgctaag
gctcgagaaaaaggaggcacggaaagagattggatgaaatcagctattgttgagagagaa
cttggtaatgtttcggaggagaagaaacttcttgacgaaggtctgcagcggttcccatca
ttcttcaagttgtggttgatgcttggtcagattcatgagcggtctggagagcaagcaaag
gctaaaaaagtttatgaatctggtcttaaaaactgcccacattgcatttctttgtggctt
tcacttgcaaatatagaagagaagatgattgggttgagtaaagctagagctgtttttact
atggctaggaaaaagaatcctcggagtcctgaattgtggcttgctgctgttagagctgaa
ttgtggcatggcaacaaaaaggagggtgataacttgttggctaaggccctccaagaatgt
cctaacagtggtatcttatgggcggctcaaattgagaatgttccccatcctcaacgaaaa
tcgaagagctcagatgcaattacaaaatgtgaccaggatccccatgtcatagctgcagtt
gcaaaactattttggcatgacaggaaggtagacaaggcaagggatcagcttaatagagca
gtgacacttgctccagatattggggatttctgggctttgtactacaaatttgaacttcag
catggaaacgaggacattcagaaggaagtgctgaaacgttgtgtcactgcagagcccaag
catggtgagaaatggcaagcaatttcaaaggcagttgaggatgcccaccagccaactgaa
gcaattttaaagtaa
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