Chenopodium quinoa (quinoa): 110684413
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Entry
110684413 CDS
T05764
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110684413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110684413
03036 Chromosome and associated proteins [BR:
cqi03036
]
110684413
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110684413
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110684413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1186
DUF1570
Motif
Other DBs
NCBI-GeneID:
110684413
NCBI-ProteinID:
XP_021716561
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MNVDMDTSPNYFDPHDLSIREQFRRYGKRPSTSPLQDSPASKLGEGRMSNTALYLEDIKH
EVESLGYREGTPSRTHSAYKRRSPDSQIIPEFCGAVDSSHRAGSHSLKACKIEEDMQDSG
ESTFSLFASLLDSAGQGLISIPDLILQFEKSCRDVSESIRYGSSERHRIVEDRLMRQKAQ
LLLDEAASWSLLWYIYGKGSEEVPEDLFLSPTTLHLEACQFVVSDLTAQLCLRIVLWLED
LASKALELESKVRGSHVGTYLPSSGIWHNTQRYLKKNEKNLKTVKHLDFDAPTRENAQPL
PDDRKQDESLLEDVWLLLRAGRLEEACDLCRSAGQPWRAASLCPFGGSDLVPSVEALSKN
GKNRMLQAIELESGIGRQWRLWKWACYSASERIAEQGGGKYEAAVYAAQCSNLKRMFPIC
MDWESACWAMAKSWLDVQMDMELVRLQPGRMELLKNCEEANGASPGQRVSGSGSSGRPEN
WPLQILNQQPRHLSSLIQKLHSSDMVHEAVTRGCKEQHRQIEMNLMSGDIPHLLDLVWSW
ISPSDDDQNSFRPHGDPHMIRFGAHLVLVLRFLLGDEVKDVFKEKIMNVGDLILHIYAMY
LFSQQHEELVGIYASYLARHRCIDLFVHMMELRLNASVHVKYKLFVSAMEYLPFSPGDEL
KGSFEEIIESVLSRSREIKVSKYDNSADVAEQHRLQSLDKAMTIQWLCFTPPSTVDDVEI
VGARLLLRALMHSNILFREFALMSMWRVPAMPIGAHKLLSFLAEPLKQPTENLLAFEDHD
VSDYLKEFRDWSEYYSCDATYRNWLQYELENAEVPPSELSVEEKQKVISAAKEALGSSLL
LLLRNENPWLIPGKDQIYDTTEPAVLELQATAILCLPSGECMCPDATLCATLMSALYSSV
TEEVVSNRQLMVDVKVSPKNNFCVEVILRCLAVVGDGLGPHELNDGGILASVMAAGFKGE
LSRFQAGVTMEISRLDAWYSNAEGSLIYPAAYIVRGLCRRCCLPELILRCMQVSVSLVEL
FEVPDRHDELIELVACPESEYLHLFSQQQLQEFLLFEREYSVCLMELQEESSRNTNEELY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgatatggacacttctccgaactactttgatccccatgacctcagcatcagg
gagcaatttcgtagatacgggaagaggccaagcacttctccgcttcaagatagtcctgct
tccaaacttggtgaaggtagaatgtctaatactgcattgtaccttgaagatatcaaacac
gaggttgagagcttgggttatcgagaagggacaccttccaggacacattcagcctacaaa
agaagatcccctgatagtcaaataataccagagttttgtggtgccgttgattcttctcat
cgggcagggagtcattcattaaaagcatgcaagattgaggaggatatgcaggattccggc
gaatcaacattttctttatttgcatctcttctagattctgccggccaagggcttatatct
attcccgatctaattcttcagtttgaaaaatcttgccgcgatgtttctgaatctataagg
tatggctctagtgagaggcatcgaattgtagaagatagattaatgcgacaaaaggctcag
ttattgcttgatgaagctgcttcctggtcacttctttggtatatctatggaaaaggaagc
gaggaggttcctgaagatctttttttgtccccaaccactttgcatctggaagcttgtcag
tttgttgtgtcggatctcacagcccaattgtgccttcgaattgttctgtggcttgaagat
ctagcgtccaaagcccttgaattggaaagcaaggtgcgtggatctcatgttggtacatat
ctccctagctctggcatttggcataatactcaacgatatcttaaaaagaacgaaaaaaat
ctgaagacagttaagcacttggattttgatgctccaacacgagaaaatgcacagccattg
cctgatgatagaaaacaagatgaatctcttttagaagatgtttggcttctgctacgcgcc
ggaagattggaagaagcatgtgacctctgcagatctgctggacagccatggagggctgca
agtttatgtccatttggaggatccgacctagttccatctgttgaagcactatcaaaaaat
ggtaaaaacagaatgctacaagcaattgagctggaaagtggaattggtcgtcaatggcgc
ctttggaaatgggcttgttactctgcctcagagagaatcgctgagcagggcggtggaaag
tatgaagcagcagtatatgcagctcaatgtagcaacttaaagcgaatgtttccgatatgc
atggactgggagtcagcatgttgggcaatggccaagtcatggcttgatgtccagatggac
atggaattggtccgtttgcagcctggaagaatggaactcttaaaaaattgtgaagaggct
aacggtgcaagtcctggtcaaagagttagcggttctggatcttctggaaggccagagaac
tggcctctacaaattctgaaccagcaaccacgccatctttcttctcttattcaaaaactt
cattccagtgacatggtacatgaagctgttactcgtggatgcaaggagcagcatcgccag
attgagatgaatcttatgtctggagatataccacacctactggaccttgtatggtcctgg
atatcaccttcagatgatgatcaaaattccttcaggcctcatggagatccacatatgatt
cgttttggagctcatctagtattggtgcttagatttttgcttggagatgaagtgaaggat
gtgttcaaggagaaaataatgaacgttggtgatctcattcttcacatctatgcaatgtac
ctattttcgcaacaacatgaggaactagttggaatatatgcttcataccttgcacgccat
cgttgcattgacctctttgtgcacatgatggagctacgactgaatgctagtgtacatgtt
aaatacaaattatttgtatctgctatggagtatctgccattttctcctggagatgaatta
aaaggcagctttgaggagatcatcgagagtgtattgtcaagatctcgggaaatcaaagtt
agcaagtatgataactctgcagatgttgcagaacagcatcggctacaatcacttgataaa
gctatgacaatacaatggctttgtttcactcctccatctacagttgatgatgttgaaatt
gttggtgccaggcttcttctacgagcacttatgcatagtaatatactcttcagagaattt
gctttgatgtccatgtggagggtaccagcaatgcccataggtgctcataaactgcttagt
tttcttgccgaacccctgaagcaacccacggaaaatcttctagcttttgaagatcatgat
gtatccgactatctgaaggagttcagagactggagtgagtactactcctgtgatgcaaca
tatcgcaactggttacaatatgaactggagaatgcagaggttcctcccagtgagctatct
gtggaagaaaaacagaaagtgatttcagcagcaaaagaagcacttggctcttcgctgtta
ctcctactgagaaatgaaaatccatggttgattcccggcaaagatcaaatttatgacaca
acagaacctgcagtccttgaattgcaagccacagcgatattatgtttgccttctggtgaa
tgcatgtgtccagatgccaccctatgcgccacattaatgagtgccctctactcttcggtg
acagaggaagttgtatcaaatcgacaattgatggtcgatgttaaggtttcgcctaagaat
aatttctgtgttgaggttatcctccgctgcttagcagtggtaggtgatggattagggcct
catgaactgaatgatggtggtatccttgccagtgtaatggcagcggggtttaaaggtgaa
ctttctcgatttcaagctggtgtcacaatggagatttcacgattggatgcttggtattct
aatgctgaaggatccttgatatacccagctgcatacattgtgcgtggtctctgtcgtagg
tgttgtcttccagaattaattctacgctgcatgcaggtgtctgtttcattagtggagttg
tttgaggttcctgacaggcatgacgagttgattgagcttgttgcttgcccagaatcagaa
tatcttcatttatttagtcaacagcaactgcaggaatttttgttgtttgagagggagtat
tcagtatgcttgatggagctccaggaggaaagctctaggaataccaatgaagaattgtac
tga
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