Chenopodium quinoa (quinoa): 110685469
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Entry
110685469 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110685469
KO
K06100
symplekin
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110685469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110685469
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110685469
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110685469
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110685469
U7-dependent histone pre-mRNA processing factors
110685469
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
110685469
NCBI-ProteinID:
XP_021717692
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MEEVGLRVLEHSYMQVPALLAQLKDEDPGVACQAIVSGTKFFYSTLQELAQQFHRHDKVE
RWVEETWMQMIEFKDAVFSLVFEAAAVRTRLLALKFLETCILLFTPDAVNTNRLTSGGKE
HRFNISWLANDHPVLDLAKLASEANRLFTSLLDMLRSSSSIPGPLTITIVNCLASIARKR
TEHYGHILSALLDFHSKSETRSGHAASLQYSVRSALLGFLRCTHPVFIESRDRLVQELRS
MNAGDAVDQVLRQVDKLMRNNERSSREARMVKEEQSSTQLPLSGDPIKRKLLPVDNEERD
NDVEMPSKRLRYTSNGRSPDLVQIHGSADDNPVINGVPSEAPMVDNDVNPVEQMITVIAA
LLAEGERAAESLELLISQIHPDLLADIVITNMKHLPKTAPLPKQGALSSNAQNISAVSAA
QITDSTSLPVLPPLSAQQGSIPAAVTFSTPPPDYSGSATLQVDSRRDPRRDPRRLDPRRV
AVPSEAPLLPLAEEATHVSSILEGPAFVNRTTSLTSAPITEHISSHFVPDAEVDVKSSTL
LVPENEVMPKEEEADESREILPSSDVNVLVNRALSPDHAVNESPITLTSFKIEPTDAACT
SYIQESDEDSPPVSNTSACEETCEDLPEVPSYVYLTEKQRQTIKKLAVEQIVKSYKQLKD
QEYCRTRNSLIARLVSWMEADDLVIVMVQQDIVLDYKDQQGHDLVMHILYHLHGLITTEG
EQSPGAADLYEKFLLGVAKSLLDTLPASDKSFSRLLGEAPMLTDSIMRLLENLCCPDGSD
MRGKDVRDDRVTQGLGAVWSLILGRPLNRLACLSIALKCAVHSEDDTRAKAIRLVSNKLY
QLNYVSETIEQYAKNMLLSAVDCTTDADASESISAGVVEETSISGPQIIDSGISHADSQA
GASMSFPEAQRLVSLYFSLCTKKPGLLQLVFDVYARAGKIVKQAIHRHIPILLRALGSSY
SQLLRIISDPPMGSENLLMLVLQILAEQTTPPPDLISTVKHLYETKLKDATILIPMLSSL
SKNEVLPIFPRLVDLPLDKFQQALAHILQGSAHTGPALTPAEVLVAIHDIVPEKEKIALK
KVTDACTACFEQRTVFTQHVLAKALNQMVDRTPLPLLFMRTVIQAIDAFPTLVEFVMEVL
SKLVNRQIWRMPKLWVGFLKCVSQTQPHSFQVLLKLPAPQLENALNKYSNLRGPLASYSS
QPSIKSSLPSSTLAVLGLASETHPTQPHLSTPLHTSDSSSVRGATST
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttgggttgagagtgttggagcattcttacatgcaagtgccagccctgttg
gcgcagttaaaggatgaagatcctggtgttgcttgtcaagctattgttagtggcacaaaa
ttcttttattctacacttcaggagttggctcagcagtttcaccgacatgataaagttgag
aggtgggttgaggagacgtggatgcagatgattgagttcaaggatgcagtattttctctt
gtatttgaggcagctgctgtgaggacaaggttattggcgctgaaatttttggaaacttgc
atattgctatttacaccagatgcagttaatactaatagactgacctcaggaggtaaggag
catagattcaatatctcatggttggctaatgaccatccagttctagatctagctaaactt
gcatcagaagcaaataggctattcaccagtttattagatatgttgcgatcatccagtagc
attcctggtccattgacaatcaccattgtcaattgtttggcttctattgcaagaaagaga
acagagcactatggtcacattttatctgcacttcttgacttccattcaaaatctgaaacc
agatcaggtcatgctgctagtctacagtattctgtaagaagcgccttattgggcttcttg
agatgtactcatccagttttcattgagtccagggacagattagttcaagaattgcgctca
atgaatgctggtgatgctgttgatcaagttcttcgacaagttgacaaactaatgagaaat
aatgagcgttcttctcgagaagcccggatggttaaggaagaacagtcatcaacccagctt
ccgctttcaggggatccaataaagaggaagcttttgcctgtggacaatgaggagcgtgat
aatgatgttgaaatgccttcaaaacgtttgcgttacacttctaatggaagatctcctgat
cttgtacagattcatgggtctgctgatgacaatcctgttattaatggggttccttctgaa
gctcccatggtggataatgatgtgaaccctgttgaacaaatgattactgtcattgctgca
ttgttggcagaaggcgaaagggctgccgagtctcttgaacttttaatatctcaaattcat
cctgatctgttagctgatattgtcataaccaatatgaagcatttgccgaagaccgcacct
ttaccaaagcagggggccctttcctccaatgcacaaaatatttctgctgtgagtgctgca
caaattactgatagtacatcattgcctgtccttccaccactttctgcacaacaaggctcc
attcctgcagcagttacatttagcacacctcctcctgattactctggctctgccactctc
caagtggattctagacgtgatccaagaagggatcccagacgcttggatcccaggcgagtt
gcagtgccttctgaagctccattgcttcctcttgcagaggaagctacacatgtctcatct
atattggaaggtcctgcttttgttaatcgaaccacttcactaacttcggcaccaatcacc
gaacacatctcttcgcattttgtgcctgatgctgaagttgatgtgaaaagttcaaccctt
ctggttcctgagaacgaagtaatgccaaaagaagaggaagcagatgaatccagggagata
ttaccatcttcagatgttaatgtgcttgttaatcgtgcactctctcctgatcatgcggtc
aatgagagccccatcactctgacatcttttaaaatagaaccaaccgatgctgcatgtact
tcatatattcaagaatctgatgaagattctcctcccgtttcaaacacatctgcatgtgaa
gaaacttgcgaagacttgcccgaagttccatcttatgtttatttaacagaaaaacagaga
caaacaataaagaaactggccgtggaacagattgtcaaatcatacaaacaattaaaagac
caagaatattgcaggactaggaattcactaattgctcgattggtctcttggatggaagct
gatgaccttgtgatagtgatggtgcaacaagacattgtgttggattacaaagatcagcag
ggacatgacctagtgatgcatatcttataccatctccatggtctgataactacagaaggt
gaacaatctcctggtgctgctgacttgtatgagaaattccttcttggagttgcaaaatct
ttgctggatactctgcctgcttcagacaagtcttttagcagactgcttggtgaagctcca
atgttgacagattctataatgagactcctggagaatctctgctgtcctgatgggtcagac
atgcgtggaaaagatgttcgagacgatcgtgtcactcaaggtcttggagctgtctggagc
ctgattttgggacgtccactaaatcgattggcctgtttgagtattgctctcaagtgtgcg
gtacattcagaggatgatactcgcgctaaggccatccgtctggtttcgaacaaattgtac
caactcaattatgtatctgaaacaattgagcaatatgctaagaacatgttgctttcagct
gtggactgtacaacagatgctgatgcatccgaatctatttcggcaggagttgttgaagaa
acttctatcagtggtccccaaataatagattctggtatatcccatgctgattctcaggct
ggtgctagcatgtcatttcctgaagctcaacgtctagtatctttgtatttttccctttgt
acaaagaaacctggtctccttcagcttgtgtttgatgtctatgcacgagctggtaaaatt
gtgaagcaggctattcatcgccacattcctattttattgagggctcttgggtcatcgtat
tctcaactgctccgcattatatctgacccaccaatgggaagtgagaacttgttgatgctg
gtgctccaaatattagctgaacaaaccactcctccacctgatcttatttctaccgtcaaa
catctatatgaaactaaactgaaggatgctactatcctcattccaatgctttcttctctt
tccaaaaatgaggttttgcctatattccctcggcttgttgaccttcctctagataaattt
cagcaggcactggctcacatattacagggttcagctcatactggtccagcattaacacct
gctgaggttttggttgctatccatgacattgtgccagagaaggaaaaaattgcacttaaa
aaggtaacagatgcttgcacggcttgttttgagcaacgtactgtgttcactcaacatgta
ttggcaaaggctttaaaccagatggttgatcgaactccacttcctctactttttatgaga
actgtaatccaagcaattgatgctttccctactctggttgaatttgtcatggaggttctc
tccaaactcgtcaatagacagatctggagaatgccaaagctctgggtaggtttcttaaaa
tgtgtgtctcagacgcagccacattcattccaagtactattaaagttacctgcaccccag
cttgaaaacgccctcaacaaatacagtaacctcagaggtccccttgcttcatattccagt
cagccaagcatcaaatcttctctaccaagttcaacccttgctgttcttggtcttgcaagt
gaaacacatccaactcagccacatctttcaactcccttgcatacctctgattcaagctct
gttcgtggggcaacatcaacgtga
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integrated database retrieval system
