Chenopodium quinoa (quinoa): 110685482
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Entry
110685482 CDS
T05764
Name
(RefSeq) THO complex subunit 5A-like
KO
K13174
THO complex subunit 5
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110685482
09122 Translation
03013 Nucleocytoplasmic transport
110685482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110685482
03041 Spliceosome [BR:
cqi03041
]
110685482
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110685482
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110685482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110685482
NCBI-ProteinID:
XP_021717701
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MEDAAASTSTSTSTSEANVAPPMAVEKSPYDLLKESKLSVEEIVAKMLSLKKDDKPKPEL
RELVTQMFLNFVSLRQANRKILLEEDRVKAETEHAKAPVDSTSLQLHNLMYEKSHYLKAI
KACKDFKSKYPDIQLVTVAEFFSQAPEEFKGTAVSNETAHNLMLKRLNYELFQRKELCKL
RETLEQKKKSYLETIANRKKFLSSLPSHLKALKKASLPAQNQLGLLHTKKQKQLHAAELL
PQPLYIIYSQFMAQKEAFGENIELEINGSLKDAQAFVRRQTQKDTGISSMQESSRIDDDV
VDEEDDGQRRRKRPKKMAGKENADAAGLYQAHPLRIIVHVHDDEVSDPKSARLVTLKFEY
LFKLNVVCVGVEGSDQGPENNILCNLFPDDTGLELPHQSAKLLLGDGAEFDEKRTMHPYK
WAQHLAGIDFLPELSPSSTSNEAAKFEAGKDSVISGLSLYRQQNRVQTVVQRVRLRKKAQ
LALVEQLDSLTKHTWPHLICQSVPWAAHQHRCFLHRWSPLGSSLDQGIPIPRVDVEQGHI
FLDTNMAGRAGSSKEEGIVTEDGELPSLVPAVVVTDEESTANLNQGSVAKHSKRMTLITK
IKTVPVKTARNQSFGRNEDDMDLMMDSESEVDDTPQTDREDESTIDEGNFWVDYAVKEFE
LVLTRKRDVEGDVDLEAKICISMEYPLRPPLFRLSLRAQSSDGNSSSFDHSIWYNELRAM
EAEVNLHILKMLPHDQEDYILSHQVHCLAMLFDLYLNEASQPSEERKSNSVIDIGLCKPV
SGDLKARSIRGRDRRKMISWKGMECTPGYPY
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgcggcggcgtcaacgtcaacgtcaacgtcaacgtcggaagctaatgttgct
cctccaatggcggtagagaaatctccctatgatttgctgaaagaaagcaagctttctgtg
gaagaaatagttgctaagatgctctctctcaaaaaggatgataaacctaaacctgagctt
cgcgagcttgtcactcagatgttcctcaatttcgtctctcttcgtcaggcaaaccgtaag
atcttgcttgaagaagatcgcgtgaaagctgagactgaacatgcaaaagcacctgtggac
tccacgagtttgcaacttcataatttgatgtatgagaagagccactacctgaaagctatt
aaggcatgcaaagacttcaaatccaagtatcctgacattcaacttgttactgtggctgag
ttttttagtcaagctcccgaagagtttaaaggaactgctgtatcaaatgaaactgctcac
aacttgatgcttaaaaggcttaattatgagcttttccagagaaaagagctatgcaagctt
cgtgagacgctggagcagaaaaagaaaagttatttggagactattgccaacagaaagaag
ttcttgtcaagtcttccctcacatctcaaggctttgaagaaggcgtcattgcctgcacaa
aaccaactaggacttttacatacgaagaaacaaaaacagctgcatgcagcagagttgctt
cctcagccattgtatataatttactctcagttcatggcccaaaaggaagcttttggggaa
aacattgaattggaaataaatggaagcttaaaggatgctcaagcctttgttaggcggcaa
acacagaaagatactggcatatcatccatgcaggaaagttcacggatagatgatgatgta
gtggatgaggaagatgatggtcaaagaaggagaaagcgacccaaaaaaatggctggcaag
gaaaatgctgatgcagctggattatatcaagctcatccacttagaattattgtccatgtc
catgacgatgaagtttctgatccaaagtctgccagacttgttactttgaagtttgagtac
ctgtttaagctgaatgttgtttgtgtgggtgttgaggggtctgatcaagggcctgaaaat
aatattctgtgcaatctattccctgatgacacgggccttgagctacctcaccaatctgct
aagctcctcttgggtgatggagcagaatttgatgaaaaacgtactatgcacccatataaa
tgggcccagcatttggcaggaattgattttctgcctgagttatcgccctcatccactagt
aatgaagctgctaagtttgaagctgggaaggactctgttatttcaggactttcactctat
cggcagcaaaatcgagtgcagacggtggtgcagagagttaggttgaggaagaaggctcag
cttgcacttgtggaacagcttgattcacttacaaaacatacatggccccatctgatctgt
caaagtgttccgtgggctgcacatcaacaccggtgttttctgcataggtggtcaccccta
ggatcttctcttgaccaaggtattcctatacctagagttgatgtggagcaaggccatatt
tttttggatacaaacatggcaggaagagctgggtcctctaaagaagaggggattgtgaca
gaagatggagaacttccatctttggttccagcagttgttgtgactgatgaggaatctact
gctaatctaaatcaaggatcagttgccaaacattctaaacggatgacattaataacaaaa
attaaaacagtcccagtcaaaactgccagaaatcagagttttgggcgaaatgaggatgat
atggatcttatgatggatagtgaaagtgaagtagatgacactccccaaactgaccgggaa
gatgaaagtactattgacgagggaaatttttgggtggattatgcagttaaagagtttgaa
cttgttttaactcggaaaagagatgtggagggggatgttgacctagaggccaagatatgt
ataagcatggagtatccactcaggcctcctcttttcagattgagtttacgtgctcagtct
tctgatggaaacagttcatcctttgaccactccatatggtacaacgagcttcgtgccatg
gaagctgaggttaatcttcacatactgaagatgttacctcatgatcaagaagactatatc
ttgtctcatcaagtgcattgtcttgcaatgctctttgatctctacctaaatgaggcctct
caaccctcggaagaaagaaaatccaattcggtaattgatattggcttgtgcaagccagtc
agtggtgatctgaaagccagatctatcaggggaagggatcgccggaaaatgatatcttgg
aagggtatggaatgcacccctgggtatccgtattga
DBGET
integrated database retrieval system