KEGG   Chenopodium quinoa (quinoa): 110685482
Entry
110685482         CDS       T05764                                 
Name
(RefSeq) THO complex subunit 5A-like
  KO
K13174  THO complex subunit 5
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03013  Nucleocytoplasmic transport
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110685482
  09122 Translation
   03013 Nucleocytoplasmic transport
    110685482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110685482
   03041 Spliceosome [BR:cqi03041]
    110685482
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110685482
Spliceosome [BR:cqi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110685482
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 110685482
NCBI-ProteinID: XP_021717701
LinkDB
Position
Unknown
AA seq 811 aa
MEDAAASTSTSTSTSEANVAPPMAVEKSPYDLLKESKLSVEEIVAKMLSLKKDDKPKPEL
RELVTQMFLNFVSLRQANRKILLEEDRVKAETEHAKAPVDSTSLQLHNLMYEKSHYLKAI
KACKDFKSKYPDIQLVTVAEFFSQAPEEFKGTAVSNETAHNLMLKRLNYELFQRKELCKL
RETLEQKKKSYLETIANRKKFLSSLPSHLKALKKASLPAQNQLGLLHTKKQKQLHAAELL
PQPLYIIYSQFMAQKEAFGENIELEINGSLKDAQAFVRRQTQKDTGISSMQESSRIDDDV
VDEEDDGQRRRKRPKKMAGKENADAAGLYQAHPLRIIVHVHDDEVSDPKSARLVTLKFEY
LFKLNVVCVGVEGSDQGPENNILCNLFPDDTGLELPHQSAKLLLGDGAEFDEKRTMHPYK
WAQHLAGIDFLPELSPSSTSNEAAKFEAGKDSVISGLSLYRQQNRVQTVVQRVRLRKKAQ
LALVEQLDSLTKHTWPHLICQSVPWAAHQHRCFLHRWSPLGSSLDQGIPIPRVDVEQGHI
FLDTNMAGRAGSSKEEGIVTEDGELPSLVPAVVVTDEESTANLNQGSVAKHSKRMTLITK
IKTVPVKTARNQSFGRNEDDMDLMMDSESEVDDTPQTDREDESTIDEGNFWVDYAVKEFE
LVLTRKRDVEGDVDLEAKICISMEYPLRPPLFRLSLRAQSSDGNSSSFDHSIWYNELRAM
EAEVNLHILKMLPHDQEDYILSHQVHCLAMLFDLYLNEASQPSEERKSNSVIDIGLCKPV
SGDLKARSIRGRDRRKMISWKGMECTPGYPY
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggaagatgcggcggcgtcaacgtcaacgtcaacgtcaacgtcggaagctaatgttgct
cctccaatggcggtagagaaatctccctatgatttgctgaaagaaagcaagctttctgtg
gaagaaatagttgctaagatgctctctctcaaaaaggatgataaacctaaacctgagctt
cgcgagcttgtcactcagatgttcctcaatttcgtctctcttcgtcaggcaaaccgtaag
atcttgcttgaagaagatcgcgtgaaagctgagactgaacatgcaaaagcacctgtggac
tccacgagtttgcaacttcataatttgatgtatgagaagagccactacctgaaagctatt
aaggcatgcaaagacttcaaatccaagtatcctgacattcaacttgttactgtggctgag
ttttttagtcaagctcccgaagagtttaaaggaactgctgtatcaaatgaaactgctcac
aacttgatgcttaaaaggcttaattatgagcttttccagagaaaagagctatgcaagctt
cgtgagacgctggagcagaaaaagaaaagttatttggagactattgccaacagaaagaag
ttcttgtcaagtcttccctcacatctcaaggctttgaagaaggcgtcattgcctgcacaa
aaccaactaggacttttacatacgaagaaacaaaaacagctgcatgcagcagagttgctt
cctcagccattgtatataatttactctcagttcatggcccaaaaggaagcttttggggaa
aacattgaattggaaataaatggaagcttaaaggatgctcaagcctttgttaggcggcaa
acacagaaagatactggcatatcatccatgcaggaaagttcacggatagatgatgatgta
gtggatgaggaagatgatggtcaaagaaggagaaagcgacccaaaaaaatggctggcaag
gaaaatgctgatgcagctggattatatcaagctcatccacttagaattattgtccatgtc
catgacgatgaagtttctgatccaaagtctgccagacttgttactttgaagtttgagtac
ctgtttaagctgaatgttgtttgtgtgggtgttgaggggtctgatcaagggcctgaaaat
aatattctgtgcaatctattccctgatgacacgggccttgagctacctcaccaatctgct
aagctcctcttgggtgatggagcagaatttgatgaaaaacgtactatgcacccatataaa
tgggcccagcatttggcaggaattgattttctgcctgagttatcgccctcatccactagt
aatgaagctgctaagtttgaagctgggaaggactctgttatttcaggactttcactctat
cggcagcaaaatcgagtgcagacggtggtgcagagagttaggttgaggaagaaggctcag
cttgcacttgtggaacagcttgattcacttacaaaacatacatggccccatctgatctgt
caaagtgttccgtgggctgcacatcaacaccggtgttttctgcataggtggtcaccccta
ggatcttctcttgaccaaggtattcctatacctagagttgatgtggagcaaggccatatt
tttttggatacaaacatggcaggaagagctgggtcctctaaagaagaggggattgtgaca
gaagatggagaacttccatctttggttccagcagttgttgtgactgatgaggaatctact
gctaatctaaatcaaggatcagttgccaaacattctaaacggatgacattaataacaaaa
attaaaacagtcccagtcaaaactgccagaaatcagagttttgggcgaaatgaggatgat
atggatcttatgatggatagtgaaagtgaagtagatgacactccccaaactgaccgggaa
gatgaaagtactattgacgagggaaatttttgggtggattatgcagttaaagagtttgaa
cttgttttaactcggaaaagagatgtggagggggatgttgacctagaggccaagatatgt
ataagcatggagtatccactcaggcctcctcttttcagattgagtttacgtgctcagtct
tctgatggaaacagttcatcctttgaccactccatatggtacaacgagcttcgtgccatg
gaagctgaggttaatcttcacatactgaagatgttacctcatgatcaagaagactatatc
ttgtctcatcaagtgcattgtcttgcaatgctctttgatctctacctaaatgaggcctct
caaccctcggaagaaagaaaatccaattcggtaattgatattggcttgtgcaagccagtc
agtggtgatctgaaagccagatctatcaggggaagggatcgccggaaaatgatatcttgg
aagggtatggaatgcacccctgggtatccgtattga

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