Chenopodium quinoa (quinoa): 110685791
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Entry
110685791 CDS
T05764
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110685791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110685791
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110685791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
110685791
NCBI-ProteinID:
XP_021718005
UniProt:
A0A803L6S6
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MVHSAYDSFELISDFPTKIDAVESYGSKLLLGCSDGSLRIYSPESASDSSPPSDYHASQL
ELLKEPYSQERTINGFARRPIIAMEVLRSQELLSLSESISFHKLPSFETVAVISKAKGAN
AYSWDESRAFLCFSKQRKIWIFRHDGGRGFVEVKDYNVSDTVKSMAWCGENICIGVRKEY
MILNATTGAMSEVFSSGRISPPLVVSLPSGGFLLGKDNIGVFVDQNGKLGQEGRICWSEA
PSQIVIHEPYAIGLLSKHIEIRSLQQSFPLIQTVGLRNVRHVIRSNSAIIVSLEKSVYGL
FPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRAAKESSIHIRYAHHLFENGSYEEA
MEHFVDSQVDITYVLSLYPSIIVPKSTVLPEPQKVTDFGLDASDLSRCSSGISDDMETSP
RAHSDLEENASVESKIVSHNTLMALIKFLQKKRFNIIEKAAAEGTDEAVSDAFGANFKSY
DSNRSKKSNKGRGSVPISSGGRERAAILDTALLQALILTGQSSAAVELLRGVNFCDLKIS
EEFLHKSCQYTALLELYKCNDMHREALKLLLQLIEESKSEPPRPELIQKFTPEMIIDYLK
PLCGTDPMLVLEFAMLVLESCPTQTIELFLSGNIPADLVNSYLKQHAPNMQARYLELMLS
MNEDGVSGHLQNEMVQIYLSEVLDWYRELSSQQKWDETAHSPTRKKLLSALENISGYNPE
GLLKRLPADALYEERAILLGKLNQHELALSLYVHKLHVPELALSYCDRVYESQLNQPPGR
SQSNIYLTLLQIYLNPRRTTRNFERRINNLVSTPNAEIKRNNSSASIRSKGRLPRKIAEI
EGAEDVRFSPSNTDSGKSDGDADEANSEGGSNIMLDEALDLLSRRWERINGAQALKLLPK
ETKFKNLLSFLGPLLRKSSETHRNFAVIRRLRESENLQVKEELYDKRKAVVKVTGDSMCS
LCNKKIGTSVFAVYPNGTTLVHFVCFRDSQSMKAVKGSQSRKRSQ
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggtccacagtgcatatgattccttcgagctaattagtgatttccccacaaagattgat
gctgttgaatcatatggctcaaaacttctccttggctgcagcgatgggtcacttcgaatc
tattctcccgagtctgcatccgattcatctccgccatctgattatcatgccagccaatta
gagcttctaaaagaaccctactctcaagagagaaccataaatggctttgcaaggaggcca
atcattgcaatggaggttttgaggtcgcaagagcttctttctctctctgagtctatttca
tttcataagctcccttcctttgagactgttgccgtaatttccaaggccaaaggtgcaaat
gcttattcttgggatgaatctagggcttttttgtgtttttccaagcagagaaagatatgg
atattccggcatgatggaggtcgggggtttgtcgaggtgaaagactataatgtttcagat
actgtgaagtcaatggcttggtgtggtgaaaatatatgcattggtgttcgaaaggaatac
atgatactcaatgctactactggtgcaatgtctgaagtgttttcttcagggagaatctcc
ccacctttggtggtgtctcttccttctggaggatttcttcttgggaaggataatattggg
gtttttgtggaccaaaatgggaaacttggtcaagaaggcaggatttgttggtctgaggcc
cccagtcaaattgttatccacgagccttatgctataggtctcctgtctaagcatattgag
ataaggtctcttcaacaatcatttccattaatacaaactgttggcttgcgaaatgttcgg
catgtcatacgcagcaacagtgcgattattgtttctctagaaaaatctgtctatggcctc
ttcccagttcctttgggtgcgcagatagtgcaattaacagcatctggcaattttgaggag
gccttagctttgtgtaaactccttccaccagaagattcaagtcttagagctgcaaaggag
agttctatccatattagatatgcacatcatttgtttgaaaatggtagctatgaggaggcc
atggagcattttgttgattcacaagttgatatcacatatgtgctttcactttacccatca
attattgttccaaagtcgactgtgcttccggagcctcaaaaggtgacagattttggtttg
gatgcttcagatctctcgaggtgttcgtcgggcatatctgatgacatggaaacttcacct
agagcacatagtgacttagaggaaaatgcttccgtagagtccaagatagttagccacaat
actcttatggcacttatcaagttcttgcagaagaaaaggttcaatattattgaaaaggct
gcagcagagggaacagatgaggccgtgtctgacgcctttggtgctaatttcaaatcttat
gactccaataggtcaaagaagtcaaataagggtcgtggcagcgttcccattagctcaggg
ggtcgtgagagggctgctatactggacactgcacttctccaagcccttattctcacagga
cagtcttctgctgctgtggaactgttgagaggggtaaatttctgtgatttgaagatatct
gaggagttcttgcacaaatcatgtcaatatactgcattgctcgaattatacaagtgcaat
gatatgcaccgtgaagctttgaagcttttgctccaactaattgaagagtcaaagtcagag
cccccacgacctgagctcattcagaagttcactcctgaaatgatcattgactacctgaag
cctctttgtgggacagaccccatgcttgtgctggaatttgcaatgcttgttcttgaaagc
tgtccaacacagactattgagctctttctatcaggaaatattccggcagacttggtgaat
tcctatttgaaacagcatgctccaaatatgcaggctagatatctagaacttatgctttcc
atgaatgaagatggggtctctggtcatctacagaatgaaatggtgcaaatctatctgtca
gaggttcttgattggtatagagaactgagctcacaacagaaatgggatgagacagctcac
tctccaacaaggaagaaattattatctgctttggagaacatttcagggtacaacccagaa
ggtcttttaaaacgtcttccagctgatgccttgtatgaagaaagggctatattgttgggg
aagctgaatcagcatgaacttgccctttctctctatgtacataagcttcatgttcctgaa
ttggctctttcttattgcgatcgagtctacgagtctcagcttaatcaacctcctggaagg
tctcagagcaatatatatcttactctcctgcaaatctatttaaatcctagaagaacaaca
agaaactttgagagacgaatcaacaatctcgtctcgacgcctaatgctgaaatcaaaaga
aataattcctctgcttcaattagaagcaaaggtcgtcttcctagaaaaattgctgaaata
gagggtgcagaagatgtgcgctttagccccagcaatacggatagtgggaagagtgatggt
gatgcagatgaagccaactctgaaggggggtccaatataatgcttgatgaggcccttgat
ttgttgagccgcagatgggaaagaatcaatggggcacaagccctgaagttgttacccaaa
gaaactaagtttaagaatttgctttcttttcttggaccactcttgagaaaatctagcgaa
acacacaggaattttgcagtgattaggagacttagagagagtgagaatctccaggttaaa
gaggaactctatgataagaggaaagctgttgtaaaggttacaggtgatagcatgtgttcc
ctctgcaacaagaagataggaacaagcgtgtttgctgtctatccaaatggaacaacacta
gtccactttgtttgctttagggactcacagagcatgaaggctgtgaaaggttcccaatca
agaaaaagatcacagtag
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