Chenopodium quinoa (quinoa): 110685899
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Entry
110685899 CDS
T05764
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110685899
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110685899
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110685899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
DUF5937
DUF6799
Motif
Other DBs
NCBI-GeneID:
110685899
NCBI-ProteinID:
XP_021718143
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MAKDKHNGGFLVSSQSELAHKEKASKKAKGGGFESLRLSPNVFNGIKRKGYKVPTPIQRK
TMPIILAGSDVVAMARTGSGKTAAFLIPMLEKLKQHVPQHGIRALILSPTRDLALQTMKF
CKELGRFTDLRMSLLVGGDSMENQFEELAKNPDIIIATPGRLMHHLSEVDDMTLRTVEYV
VFDEADSLFGMGFAEQLHSILNQLSESRQTLLFSATMPHALAEFAKAGLRDPQLVRLDVE
KKISADCKLTFFTLRPEEKNAALVYLIRDVVRSEEQMLIFVSTKHHTEFLRSLLLIEGIE
SNICYGDMDQEARKISISKFRSGKTKLLIVTDVASRGMDIPLLDNVLNWDFPSNPKMFVH
RVGRVARNGRTGTAYSFVTPEDIPYLLDLHLFMSKPIRPAPTEEEYLKDINQVMDKIEQA
MANGVTVYGRFPQTALDLVQDKVRDDIDSSSDIQALLKASKNASHQYIKTKPAPSKASIR
RAKDLPREGLHPMFKGELEGNELSALAFTERLKSFRPKQTILEAEGRAAMSKRRKGPSSQ
WVDVMKEKKAIHDHIIKQVQQQCSTVTEAEEEEPGSNFVNEMENKETVGSKRKAQSFRNE
EYFINPVPTNQHTEAGLSMRAELGFGSNRLDSAVMDLVADDKVGMQKQKVHWDKKSKKFV
KLNNGDRVTATGKIKTEGGKKVKAQRTGIYKKWKASTHNKIALKGHDSGGNVGSSSGFSG
GGRFNKRFNRHNQQRSIPNAHVPSEIKNLEQVRKERQKKATQQSLIKHNSKKGKKSGKNG
KKRKSR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacaagcacaatggaggtttcctcgtgagctcacaatcagagctagctcac
aaagagaaagcaagcaagaaagcaaaaggaggtgggtttgaatccctaagacttagtcct
aatgtcttcaatggaatcaaaaggaagggttacaaagtaccaaccccaattcagcgcaaa
actatgccgattattcttgctgggtctgatgttgttgctatggcgcgaactgggtctggt
aaaacggcggcgtttcttattcctatgttggagaaattgaagcagcatgttcctcaacat
gggattagggctttgattttgtctcctactagggatttggctcttcaaactatgaagttt
tgtaaggaattggggcgttttacagatcttcgtatgagtcttttagttggtggggattca
atggaaaatcaatttgaagaattggctaagaatcctgacattattattgctacaccgggt
agactgatgcatcatttgtctgaggtggatgacatgacacttcgaactgtggaatatgtg
gtctttgatgaagctgattctttatttggtatgggttttgctgagcaactgcatagcatt
ctgaatcagttgagtgagagtaggcaaactttgctttttagtgcaactatgccacatgct
ttggcagagtttgctaaggctggtctgcgagatcctcagcttgtacgcctagacgtggag
aagaaaattagtgcagactgtaagctcacctttttcaccttgaggccagaagagaaaaat
gcagccttagtgtatttgattagggacgtggttagatctgaggagcaaatgttaatcttt
gtttccactaaacaccatacagagttcctgagatcgttgcttttgattgagggtattgag
tccaatatatgctatggtgatatggatcaagaagcgcgcaaaataagcatatcaaaattc
cgatcaggaaaaactaagctgctaattgttacagatgttgcgtctagaggaatggatatt
cctttgcttgataatgtactcaattgggacttcccttcaaatcctaaaatgtttgtgcac
cgtgttggaagagttgccaggaatggtcggaccggtacagcttactcttttgtgacacct
gaagatatcccttaccttttggatcttcatctctttatgtcaaaacccatcagacctgct
ccaacagaggaggaatatctaaaggatattaatcaggttatggataaaattgaacaagct
atggccaatggtgttactgtgtatggccgttttcctcagactgctttagatcttgtgcaa
gataaagtacgggacgacattgactcatcgtccgatatacaagctttgctgaaggctagt
aaaaatgcatcccatcagtatataaagacaaaacctgcaccctcaaaagcatcaatccgg
agggcaaaagatttaccccgcgaaggcttgcatcctatgttcaaaggtgagttagaaggc
aatgagctgagtgctttagctttcactgagcgcttgaaatccttcagacccaagcagaca
attttggaggctgaaggccgtgctgcaatgtcaaagcgtcgaaagggtccttctagtcaa
tgggttgatgtgatgaaggagaaaaaggccatccatgatcacattattaaacaagtgcag
cagcaatgttctaccgttacggaagccgaggaagaggaacccggttccaattttgtcaat
gaaatggagaataaagaaactgttggttctaaaaggaaagcacagagcttcaggaatgag
gagtattttatcaatccagtgcctacaaaccagcatacagaggctggactatcaatgcga
gctgaactaggttttggttcaaataggttggattcagctgttatggatctagttgcagat
gataaagtgggaatgcagaaacaaaaagtccactgggataagaaaagtaaaaagtttgtc
aagcttaacaatggtgatcgtgtgactgccaccggaaagattaagactgaaggagggaaa
aaagtgaaggctcagagaactgggatttataaaaagtggaaagctagtacacacaataaa
attgctctaaaaggacatgatagtggaggcaatgtgggatcatcctctggattttcaggt
ggtggtcggtttaataagaggttcaacagacacaaccaacagcgttcaataccaaatgca
catgttccttcagaaatcaaaaatcttgaacaagttcgcaaagagagacagaagaaagca
acccagcaatctttgataaagcacaattcaaagaaggggaagaaatctggtaaaaatggc
aagaaacgaaagtccaggtag
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