Chenopodium quinoa (quinoa): 110686069
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Entry
110686069 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03030
DNA replication
cqi03410
Base excision repair
cqi03420
Nucleotide excision repair
cqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110686069
03410 Base excision repair
110686069
03420 Nucleotide excision repair
110686069
03430 Mismatch repair
110686069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqi03032
]
110686069
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110686069
DNA replication proteins [BR:
cqi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110686069
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110686069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
Rad17
AAA_30
AAA_22
Gp44_lid
nSTAND3
AAA_19
AAA_assoc_2
Zeta_toxin
BRCT_2
AAA_18
RuvB_N
AAA_5
DNAX_ATPase_lid
Sigma54_activ_2
AAA_14
AAA_33
RsgA_GTPase
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
110686069
NCBI-ProteinID:
XP_021718348
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MSDIRKWFVKKHDKENSNAAKPAAAKPASEKPSATTSETQKALAQESAARRKTSKYFDKD
QEKSKVGTQKMEVPAKPSPAKKVHKLEEENVDDDDDDFAPISSKKKSVEATPSKKLKGSS
GRGIAKKNVVVDESDEEMDEKKETPTPVKSVGRGRGRGAAPATAAGGGGRGRGRGGFMNF
GERKDPPHKGEKEVPEGSPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKT
NFLLCDDDIGGRKSEKAKELGTPFLTEDGLFDMIQKSKKTKTPDQCNSKKPLESTPSSSA
KKIQQNVVKKADVGSYSANSQAPKSSTPAKEKDLSKQGPSLTWTEKYKPKVPNDIIGNQK
LVKDLHDWLSRWDEQFSHNKGKRKRESNSAEKKAVLMSGTPGIGKTTSAKLVSKMLKYEI
IEVNASDNRGKADSQIGKGIGGSTANSIKELISNKSLGDLDRLKNPKMVLIMDEVDGMSA
GDRGGVADLIASIKISKVPIICICNDRYSQKLKSLVNYCSLYNFRKPTKQQMAKRLLQIA
NAEGIQVNEIALEELAERCNGDMRMAVNQLQYMSLSMSVIRYDDIRQRLLSNAKDEDISP
FTAVDKLFGYNGGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSSVGKDDSGMKRLNSL
ARVAESIADGDIINVQIRRYRQWQLSQSSCVASCILPASLMHGQREIFMPGERNFNRFGG
WLGKNSTMGKNLRILEDLHVHMLASSDSYMGRGTLRIDFLTLLSKKLTEPLRTLPKEEAV
KEVVEFMDTYSLSMEDYDTLMELSKFQGHPTPTEGITPAVKSALTKGYKEGSSLRVVRTA
DMITLPGLKKAPKKRIAAILEPVDEIGEVNGDINEENEEEDTEDAEDLKDANGAKKLKLD
LESNHAKGIQVQVDLKSAGSSGAKKTQKASAGRGKGGAADPGSGKRGGRGSGSSARKKK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattagaaagtggttcgtgaagaaacatgacaaggaaaattccaatgccgcg
aaaccggccgctgcgaaaccggcatctgaaaaaccttcagccactacttctgaaacccag
aaagcgttagctcaagaaagtgctgcccgaaggaaaacaagcaaatactttgataaagat
caagagaaatcgaaagttgggacccaaaaaatggaggtgcctgccaaaccttcacctgcg
aagaaggttcacaaattagaggaggaaaatgttgatgatgatgatgatgactttgctcca
attagttccaaaaaaaagtcagttgaggctactcctagcaaaaagctaaagggaagttca
ggaaggggtattgcaaagaaaaacgtggttgttgatgaaagtgatgaggaaatggacgag
aaaaaggagactccaacgcctgtcaaatctgttggaaggggtcgtggcaggggagctgca
cctgccactgctgctggtggaggaggaaggggacgtggacgaggcggatttatgaacttt
ggtgagaggaaagatccacctcacaaaggagaaaaggaagttcctgaaggttctcctgat
tgtttagctgggttgacttttgtaatttctgggacacttgacagtttggaaagggaagaa
gcagaagatttaatcaagagacatggaggtcgtgttaccggatctgttagcaagaagacg
aattttcttttatgcgatgatgatatcgggggacggaaatctgaaaaagcgaaagaattg
ggaacaccctttcttacagaggatggtttgtttgatatgatccaaaagtcaaaaaaaaca
aaaactcctgatcaatgcaattcaaagaaaccattggaaagcactccgtcatcctctgca
aagaaaattcagcagaatgtggtgaaaaaagctgatgtgggaagctattctgccaacagt
caggctcccaagtcttcaacacctgctaaggaaaaggatttgtcaaagcaaggtccttcc
ttgacatggacagagaaatacaagcccaaagttccgaatgatataattggcaatcaaaag
cttgttaaagatcttcatgattggttatcacgttgggatgagcaattttcgcataataaa
ggaaagaggaaaagggaaagcaattctgctgagaaaaaggctgtcttaatgagtggaact
cctggcattgggaaaactacctcagcaaagttagttagtaaaatgctgaagtatgagata
atagaggttaatgccagtgataatcgtggaaaggcagattcccaaattggcaagggaatt
ggtggaagtactgcaaattctataaaggagcttattagcaataagtcccttggtgacctg
gataggttaaagaaccccaagatggttcttattatggatgaagttgatggcatgtctgcg
ggtgatcgaggtggggttgcggacctaattgctagcatcaagatctccaaagtcccaatt
atctgtatttgtaatgaccgctacagtcagaaactgaaaagtcttgtaaactattgttct
ctgtataatttccggaagcccacaaaacagcagatggcaaagaggttgttgcagattgct
aatgcagaagggattcaagtgaatgagattgctttggaagagctggcagagaggtgtaat
ggagatatgcgcatggccgtgaaccagctgcaatatatgagcttatccatgtcagttatc
agatatgatgatattaggcagcgccttcttagcaatgctaaagatgaagacatttcacca
tttactgctgttgataagttgtttggttacaatggtgggaagttgaggatggatgaacgg
attgacttgagcatgagtgaccttgatctggttcctcttcttatccaggaaaattatatt
aattatcggccaagttctgtggggaaagatgatagtgggatgaaaagattgaactctctt
gcccgtgttgctgagtcaattgctgatggagatattattaatgtacaaataaggagatat
aggcagtggcagctctctcaaagcagctgtgttgcttcctgcatactaccggcctcattg
atgcatggacaaagagagatatttatgccgggtgaaagaaatttcaacaggtttggtggt
tggcttgggaagaattcaactatgggaaagaatttgaggatcttggaggatcttcatgtc
catatgcttgcttctagtgattcatatatgggaaggggaactttacgtattgatttcctt
acgcttctttctaaaaaactaactgaaccacttcggactcttcctaaggaggaagctgta
aaagaagtagttgaattcatggatacttactcattaagcatggaagactatgacacgctt
atggagttgtcaaaatttcagggacaccctacaccaactgagggtataacaccagcagta
aaatctgctttaacaaagggatataaagaaggtagcagtttgcgcgtggtgcgaacagca
gacatgatcacccttcctggtttgaaaaaggctcctaaaaagaggattgctgctatcctg
gagccggttgatgaaattggagaggtaaatggtgatatcaatgaggagaatgaggaagag
gacactgaagatgcagaagatttgaaggatgctaatggtgcgaaaaaactcaagctggat
ctcgagagtaaccatgctaaagggattcaagttcaagtggacttgaaaagtgctggaagc
tctggcgccaaaaagacgcaaaaggcctcagcaggaagaggcaagggaggtgctgccgac
ccaggatcaggaaagagaggtggtcgtggatcaggatcttctgccaggaaaaagaaatga
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integrated database retrieval system
