KEGG   Chenopodium quinoa (quinoa): 110686688
Entry
110686688         CDS       T05764                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110686688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110686688
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110686688
 Complex B
    110686688
 Complex C
   U2 SnRNP specific factors
    110686688
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3
Other DBs
NCBI-GeneID: 110686688
NCBI-ProteinID: XP_021718985
LinkDB
Position
Unknown
AA seq 393 aa
MAFFNRINQINTQSKNRMKKHCEKMTPNISFSGEEGFGRYLDLNEIYNMCMNSKFGLYFT
SYADYIDKFPAIDLIPAKYKTTIRYKEYIEGVLKYLISFLERAKPLMFLDRIKNLESEFE
ESWTADRGKKRPRTTSIDDVIEWLDEYSTVESLIELGPMKLNEALNALGLKSGGTMHQRA
ERLLLVKNTPLERQKEKGDDELDCDKEIALIEAKVKKLCLILKETLEQTRERVKNRQGMT
YDELLRDREADNEIVALDIASDGEEDDKRNNNPLKLPLGSDGKPIPYWLYKLHGLHQEFK
CEICGDYTYKGRRAFEKHFHEARHQHGMHCLGIPNTKTFHEITQIEDAKELWWQIQLRQQ
SFLWQPDVEEYEDAEGNVYNKKTYDDLVRQGII
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggccttcttcaatcgaatcaatcaaataaatactcaatcaaaaaacaggatgaagaaa
cattgcgagaagatgacaccaaatatttccttcagcggcgaagagggattcgggaggtat
ttagatttgaatgaaatttataacatgtgtatgaattctaaatttggtttgtactttact
tcctatgctgattatattgataaatttcctgcgattgatttgattcctgcaaaatacaag
actactatacggtacaaggagtacatcgagggtgttcttaagtacttgatttcgttcttg
gaacgagcaaagcctttgatgttcttggacaggatcaagaatcttgagtctgaattcgag
gagagctggacggctgatagagggaaaaaacggcctaggacgacgagtatcgatgatgtg
atcgagtggctcgatgaatatagcactgtcgagagtctaattgagttaggaccgatgaaa
cttaacgaggcgttaaacgccttggggcttaagtcagggggtactatgcaccaaagggcg
gagaggcttctccttgtaaagaatacccctctcgaaaggcagaaggaaaaaggcgatgat
gaacttgattgtgataaggaaatcgcgctcattgaagcgaaagtgaagaagttgtgtctc
attctgaaagagactcttgagcagactagggaacgcgttaagaacaggcaggggatgact
tatgatgaactccttcgtgatcgtgaagctgataatgagatagttgcactcgacatagca
agcgatggagaagaggacgacaaaagaaacaataatccgctcaagttgccactaggttcg
gatgggaagcctataccgtactggctctacaagctacacggtcttcaccaagaattcaag
tgtgaaatatgtggggactacacctacaaggggcgaagggcctttgaaaagcacttccat
gaagcgcgtcaccaacatggtatgcattgcttgggtatccctaacaccaagacctttcat
gagatcacgcaaatcgaggatgcgaaggagttatggtggcagattcaactaaggcagcag
tcttttctatggcagcctgatgttgaggaatatgaagatgccgagggtaacgtttacaac
aagaagacctacgatgatctggttaggcagggtataatatag

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