Chenopodium quinoa (quinoa): 110687420
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Entry
110687420 CDS
T05764
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04120
Ubiquitin mediated proteolysis
cqi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110687420
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110687420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cqi04121
]
110687420
Enzymes [BR:
cqi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110687420
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110687420
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110687420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_2
zf-C3HC4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
zf-C3HC4_3
zf-RING_2
Beta-prop_WDR75_1st
WD40_like
Beta-prop_SCAP
Beta-prop_DCAF12
zf-RING_UBOX
zf-RING_5
U-box
zf-C3HC4_4
Beta-prop_NWD2_C
MutS_III
Beta-prop_WDR35_TULP_N
DUF3802
DUF1664
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110687420
NCBI-ProteinID:
XP_021719759
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAETSIGEGALVPYVKSDSPPHETAVEGGDSIAGDKDFLCPICMQIIKDAFLTACGHSYC
YMCIFTHLLNKSDCPCCGRFLTPKLIFPNFALDKISKRMCDYQFAKNASLSEQLRRALQQ
DCDVSVKDLDCLLSLLAKKKRKMEQEEAETNLQVLLEFLVCLRKRKLEELSQIQNDLQYI
KEDIDAVQKHKTELWNVNKSHTARLRLRGDDFDTKGFCDKVRRPLAGGSGTQETFPGSLQ
CKGGNLGAPCSQEHLENDVRAGSELQQQAPTEKFKARKRQVETQFTELQECYLQKRRNWA
KQKQPAEGSHMNHTNSLGYHAGLQDFQSVLTSCTRYSQLRPISELRLGNVFHYANIISSI
EFDRDHELFATAGVSKRIKVFEFSTVIDEPAEVHCAVVDIATRSKLSCLSWNKYTKHCIA
SSDYEGIVNVWDIATNQSVGEYEEHEKRAWSVDFSRTEPSLLVSGGDDCKVKVWCTKQEK
SALNIDLNANICSVKCNPGSSMHVAVGSADHNVHYYDLRNISQPVHVFSGHRKAVSYVHF
LSANELASASTDNTLRLWDVKENKLLQVYRGHTNEKNFVGLTANSEYLACGSESNEVFVY
HKAISKPVARYKFNSSELYDADEDRGAHFISAVCWKSDSPMIMAANSQGNVKLLALAT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacctccattggagaaggagctttagttccttatgtgaaatccgattctcca
ccgcatgaaaccgccgttgaaggcggagattccatcgccggcgacaaggattttctctgc
ccaatttgcatgcagattatcaaagacgcttttctcactgcttgcggtcatagttactgt
tatatgtgtatcttcactcatcttcttaacaagtctgattgcccttgttgtggtcgtttt
ctcactcctaagcttattttccctaattttgcccttgataagatatcaaagaggatgtgt
gattatcaatttgcaaaaaatgcctctttgagtgaacaacttcgccgagcactgcagcag
gattgtgatgtgtctgtgaaggatcttgactgccttttgtctctacttgcgaaaaagaag
agaaaaatggagcaagaggaggctgagacaaacttgcaagttctccttgagtttttggtc
tgcttaagaaaaagaaaattggaagagcttagtcagatacaaaatgatctccagtacatc
aaagaggacatagatgctgttcaaaagcacaaaacagaattgtggaatgtaaacaagagt
catacagctagattgagactgagaggagatgactttgatacaaaaggtttttgtgataaa
gtacggaggcctttggctggtggttctggtacacaagagacatttccaggaagtcttcaa
tgtaaaggaggcaatttaggtgctccatgctctcaagaacatttagaaaacgatgttcgt
gcaggctcagaattgcaacagcaggctccaactgaaaaatttaaagcaagaaaaaggcag
gttgagacacagttcactgaactgcaagagtgttacctgcaaaaaaggagaaactgggcc
aaacaaaagcaaccagcagaaggaagccatatgaatcatacaaatagcttaggctatcat
gcaggacttcaggattttcagtctgtgcttacttcctgtactcgatacagccagttgagg
cctatttcagagttgaggcttggtaacgtttttcactatgccaatatcatttccagcata
gaatttgacagagatcatgaattgtttgctactgctggtgtctccaagcggattaaagtt
tttgaattttccactgtgattgatgaaccagcagaagtgcactgtgctgttgttgacatt
gctacacgatctaaactaagctgtttgagttggaataagtataccaaacactgtattgcc
agcagtgattatgaggggattgtaaatgtttgggacattgctactaatcagagtgttgga
gaatacgaggagcatgaaaaacgggcttggagtgtggatttttcgcgtactgaaccttcg
ctgttggtatctggtggggatgactgcaaggttaaagtttggtgcaccaaacaggaaaag
agtgctcttaatattgacttgaatgcaaatatatgctctgtgaagtgtaatcctggatct
agcatgcatgtggctgtgggctctgcagatcataatgttcactattatgacttaagaaat
ataagccagcctgttcatgtcttttctggtcatagaaaagctgtttcatatgttcatttc
ttatctgccaacgaacttgcttctgcatcaactgataacactttgcgcttgtgggatgtc
aaggaaaataagttgcttcaggtgtatagaggtcatacgaatgaaaagaattttgtaggc
ctcactgcaaatagcgaataccttgcttgtggcagtgaatcaaacgaagtctttgtttat
cataaggctatttctaagcctgttgctcgatacaagttcaattcatcagaattgtatgat
gctgatgaggatcgaggagcacactttatcagtgcagtttgctggaagagtgacagcccc
atgattatggctgctaacagtcaaggaaatgtcaaactacttgcacttgctacctga
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