Chenopodium quinoa (quinoa): 110687435
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Entry
110687435 CDS
T05764
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110687435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110687435
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110687435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Zn_Ribbon_1
DZR_2
ZnF_RZ-type
DZR
DUF1258
Motif
Other DBs
NCBI-GeneID:
110687435
NCBI-ProteinID:
XP_021719775
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MSFDLMLKPTCGRCGSSSDLYGSNCKHLTLCSNCGKTMAENRAKCFECGTPITRLIREYN
VRTNSSNDKNYFIGRFPTGLPNFSKKKSAENKWTLQKEGLQGRPITDTLKEKLKNKPWML
EDETGQSQFQGHLEGAQSATYYLLMMQAKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKFVDGYERWMMKTASNGAAAFPTFDANLVKDIPTGGGGKGRKKSTAEKEGNASEKG
EDEGEEDADRKPKIGSSNGADDDDGNESPAGGDFDDEDDNIEKGDDWEHEEIFTDDDEAV
GNDPEEREDLAPEVPAPPEIKQDEDDDEANEEEGGLSKSGKELKKLLQGQANGLNESDRD
EEDDSSAKKKKDEEDDDDDDEEDRPSPVLAPKLKDPKDEPADSSPAKPAPGGSSRATPAS
KSAKGKRKNGDDTKSSSAAPHKKVKTENDVKSAAKENASKIGGAPKVTPPSSTKAGTSTS
GTPAQGPVSEEEIRVVLLQKAPVTTADLVATFKSRLKSPEDKKAFAEILKRISKIQKSDN
KSYVVLRERSR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatttgatgctgaagccaacatgtggtcgatgcggatcaagcagcgatctc
tatggcagcaattgcaagcatttgacgctttgctctaactgcggtaaaactatggcggaa
aatcgcgctaaatgcttcgaatgtggcacccctatcactcgattgattcgcgagtataat
gttaggacgaattcgagcaatgataagaattacttcattgggagatttccgactggattg
ccgaatttctccaagaagaagagtgcggagaataaatggactttgcagaaagaagggctt
caaggtcgcccgattaccgatactttgaaggagaagttaaagaataagccttggatgctg
gaagatgaaactgggcaatcacagttccagggtcatttggaaggtgcacaatcggctaca
tattatctcctaatgatgcaggccaaagagtttgttgcaataccagctggttcttggtac
aactttaataaggttgcacaatataagcaacttacgttagaagaggcagaggagaagatg
aaaaataggagaaagtttgttgatggttacgaaagatggatgatgaagacagccagcaat
ggggctgctgcattcccgacctttgatgcgaatcttgtgaaagatattcctactggtggt
ggagggaaaggtcgcaagaaatcaactgctgaaaaggagggtaatgcttcagaaaaggga
gaggatgaaggagaagaggatgcagataggaagccaaaaattggatctagcaatggagct
gatgatgacgacggcaatgaaagccctgctggaggtgactttgatgatgaagatgataat
attgagaaaggtgatgactgggagcatgaagaaattttcactgatgacgatgaagctgtt
ggtaatgatcctgaggagcgggaagacctagctcctgaagttcctgcacccccagagatt
aagcaggacgaggatgacgatgaggctaatgaagaggagggaggactgagcaaatcaggg
aaggagctgaaaaaattgcttcagggacaggccaatgggcttaatgagtctgacagagat
gaagaagatgacagctcagccaaaaaaaagaaagatgaagaggatgatgatgatgacgat
gaggaagatcgcccttctcccgttttagctccgaagttgaaggaccctaaagatgagcca
gctgatagcagccctgcaaaaccagctcctggaggatcttctcgggcaactcctgcctca
aaatcggcaaaaggaaagaggaaaaatggtgatgatacaaaatcttctagtgcagctcct
cataagaaggtgaaaactgaaaatgatgtgaaatcagccgcaaaggaaaatgcatcaaaa
attggtggggccccaaaagttacaccaccatcgtccacaaaggctggtacatctacttca
ggcacacctgctcagggccccgtctcggaagaagaaattagagttgtgttgttgcaaaaa
gcgcctgtaaccactgctgatcttgtggccacatttaaatcaagactaaagtcaccagag
gacaagaaggcgtttgctgaaattttgaagcggatatctaagatacagaagagtgataac
aagagttacgttgtgctaagggagaggagcagataa
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