Chenopodium quinoa (quinoa): 110688056
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Entry
110688056 CDS
T05764
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110688056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110688056
03036 Chromosome and associated proteins [BR:
cqi03036
]
110688056
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110688056
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110688056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1186
DUF1570
Motif
Other DBs
NCBI-GeneID:
110688056
NCBI-ProteinID:
XP_021720426
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MDVDMETSPNYFDPHDLSIREQFRRYGKRPSTSPLQDSPASKLGEGRMSNTALYLEDIKH
EVDSLDYREGTPSRTHSAYKRRSPDSQIIPEFCGAVDSSHRAGSHSLKACKIEEDMQDSG
ESTFSLFASLLDSAGQGLISIPDLILQFEKSCRDVSESIRYGSSERHRIVEDRLMRQKAQ
LLLDEAASWSLLWYIYGKGSEEVPEDLFLSPTTSHLEACQFVVSDLTAQLCLRIVLWLED
LASKALELENKVRGSHVGTYLPSSGIWHNTQRYLKKNEKNLKTVKHLDFDAPTRENAQPL
PDDRKQDESLLEDVWLLLRAGRLEEACDLCRSAGQPWRAASLCPFGGSDLVPSVEALSKN
GKNRILQAIELESGIGRQWRLWKWACYSASERIAEQGGGKYEAAVYAAQCSNLKRMFPIC
MDWESACWAMAKSWLDVQMDMELARLQPGRMELLKNCEEANGASPGQRVSGSGSSGRPEN
WPLQILNQQPRHLSSLIQKLHSSDMVHEAVTRGCKEQHRQIEMNLMSGDIPHLLDLVWSW
ISPSDDDQNAFRPHGDPHMIRFGAHLVLVLRFLLGDEVKDVFKEKIMNVGDLILHIYAMY
LFSQQHEELVGIYASYLARHRCIDLFVHMMELRLNASVHVKYKLFVSAMEYLPFSPGDEL
KGSFEEIIESVLSRSREIKFSKYDNSADVAEQHRLQSLDKAMTIQWLCFTPPSTVDDVET
VGARLLLRALMHSNILFREFALISMWRVPAMPIGAHKLLSFLAEPLKQPTENLLAFEDHD
VSDYLKEFRDWSEYYSCDATYRNWLQYELENAEVPPSELSVEEKQKVTSAAKEALCSSLL
LLLRNENPWLIPGEDQIYDTTEPVVLELQATAILCLPSGECMCPDATLCATLMSALYSSV
TEEVVSNRQLTVDVKVSPKNNFCVEVILRCLAVVGDGLGPHELNDGGVLASVMAAGFKGE
LSRFQAGVTMEISRLDAWYSNAEGSLIYPAAYIVRGLCRRCCLPELILRCMQVSVSLVEL
FEVPDRHEELIELVACPESGYLHLFSQQQLQEFLLFEREYSVCLMELQEESSRNAHEELY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgatatggagacttctccgaattactttgatccccatgacctcagcattagg
gagcaatttcgtcgttacgggaagaggccaagcacttctccgcttcaagatagtccagct
tccaaacttggtgaaggtagaatgtctaatactgcattgtaccttgaagatatcaaacac
gaggttgacagcttggattatcgagaagggacaccttccaggacacattctgcctacaaa
agaagatcccctgatagtcaaataataccagagttttgtggtgctgttgattcatctcat
cgggcaggaagtcattcattgaaagcatgcaagattgaggaggatatgcaggattctggc
gaatcaacattttctttattcgcatctcttctagattctgccggccaagggcttatatct
attcccgatctaattcttcagtttgaaaaatcttgtcgtgatgtttctgaatctataagg
tatggctctagtgagaggcatcgaattgtagaagacagattaatgcgacaaaaggctcag
ttattgcttgatgaagctgcttcctggtcacttctttggtatatctatggaaaaggaagc
gaggaagttcctgaagatctttttctgtccccaaccacttcgcatctggaagcttgccag
tttgttgtgtcggatctcacagcccagttgtgccttcgaattgttctgtggctagaagat
ctagcgtccaaagcccttgaattggaaaacaaggtgcgtggatctcatgttggtacatat
cttcctagctctggcatttggcataatactcaacgatatcttaaaaagaacgaaaaaaat
ctgaagacagttaagcacttggattttgatgctccaacacgagaaaatgctcagccattg
cctgatgatagaaaacaagatgaatctcttttagaagatgtttggcttctgctacgtgcc
ggaagattggaagaagcatgtgacctctgcagatctgctggacagccatggagggctgca
agtttatgtccatttggaggatccgacctagtcccatctgttgaagcactatcaaaaaat
ggtaaaaacagaatcctacaagcaattgagctggaaagtggaattggtcgtcaatggcgc
ctttggaaatgggcttgttactctgcctcagagagaattgctgagcagggtggtggaaag
tatgaagcagcggtatatgcagctcaatgtagcaacttaaagcgaatgtttcccatatgc
atggactgggagtcagcatgttgggcaatggccaagtcgtggcttgatgtccagatggac
atggagttggcccgtttgcagcctggaagaatggaactcttaaaaaattgtgaagaggct
aatggtgcaagtcctggtcaaagagttagcggttctggatcttctggaaggccagagaac
tggcctctacaaattctgaaccagcaaccacgccatctttcttctcttattcaaaaactt
cattccagtgacatggtacatgaagctgttactcgtggatgcaaggagcagcatcgccag
attgagatgaatcttatgtctggagatataccacacctactggaccttgtatggtcctgg
atatcaccttcagatgatgatcaaaatgccttcaggcctcatggagatccacatatgatt
cgttttggagctcatctagtattggtgcttagatttttgcttggagatgaagtgaaggat
gtgttcaaggagaaaataatgaatgttggtgatctcattcttcacatctatgcaatgtac
ctattctcgcaacagcatgaggaactagttggaatatatgcttcataccttgcacgccat
cgttgcattgacctctttgtgcacatgatggagctacgactgaatgctagtgtacatgtt
aagtacaaattatttgtatctgctatggagtatctgccattttctcctggagatgaatta
aaaggcagctttgaggagatcatcgagagtgtattgtcaagatctcgggaaatcaaattt
agcaagtatgataactctgcagatgttgcagaacagcatcggctacaatcacttgataaa
gctatgacaatacaatggctttgtttcactcctccatctacagttgatgatgttgaaact
gttggtgccaggcttcttctacgagcacttatgcatagtaatatactcttcagagaattt
gctttgatatcaatgtggagggttccagcaatgcccataggtgctcataaactgcttagt
tttcttgccgaacccttgaagcaacccactgaaaatcttctagcttttgaggatcatgat
gtatctgactacctgaaggagttcagagactggagtgagtactactcctgtgatgcaaca
tatcgcaactggttacaatatgaactggagaatgcagaggttcctcccagtgagctatct
gtggaagaaaaacagaaagtgacttcagcagcaaaagaagcactttgctcttcgctgtta
ctcctactgagaaatgaaaatccatggttgattcccggcgaagatcaaatttatgacaca
acagaacctgtagtccttgaattgcaagccacagcgattttatgtttgccttctggtgaa
tgcatgtgtccagatgccaccctatgtgccacattaatgagtgccctctactcttcggtg
accgaggaagttgtatcaaatcgacaattgacggtcgatgttaaggtttcgcctaagaat
aatttctgtgttgaggttatcctccgctgcttagcagtggtaggtgatggattagggcct
catgaactgaatgatggtggtgtccttgccagtgtaatggcagcgggttttaaaggtgaa
ctttctcgatttcaagctggtgtcacaatggagatttcacgattggatgcttggtattct
aatgctgaaggatccttgatatacccagctgcatacattgtgcgtggtctctgtcgtagg
tgttgtcttccagaattaattctacgctgcatgcaggtgtctgtttcattagtggagttg
tttgaggttcctgacaggcatgaggagttgattgagcttgttgcatgcccagaatcagga
tatcttcatttatttagtcaacagcaactacaggaatttttattgtttgagagggagtat
tcagtatgcttgatggagctccaggaggaaagctctaggaatgcccatgaagaattgtac
tga
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