Chenopodium quinoa (quinoa): 110688149
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Entry
110688149 CDS
T05764
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110688149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110688149
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110688149
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110688149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110688149
NCBI-ProteinID:
XP_021720545
UniProt:
A0A803KR77
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MIIIREVWASNLDSEFELIRNLIEDYPFISMDTEFPGVIHRPPPHHSNNKKHPHPRPSSS
DLYRLLKSNVDDLNLIQVGLTLSDASGNLPNLGTPNQYIWEFNFSDFDVERDPHAHDSIH
LLTQQGIDFERNKKEGIDSINFAQLIMSSGLVCNDSVTWITFHSAYDFGYLIKILTRRHL
PSNLDDFLRLTRAFFGYRVYDIKYMMKFCKSLYGGLDRVAKTLQVKRAVGKCHQAGSDSL
LTWLAFQKMVQLYFLNNLPEYHAGVIYGLDL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgattataatcagggaagtctgggcttctaatttagattctgagtttgaattaatcaga
aatctgatcgaagattacccttttatttctatggatactgaatttcctggggtcatccac
cgacctcccccacaccacagcaacaacaagaagcatcctcatcctcgtccctcctcgtct
gatctttaccggctcctgaaatccaacgttgatgatttaaatctgatccaagtgggcctc
accttatccgatgcttctggtaatctccctaatctgggcactcccaatcaatacatctgg
gagttcaacttctcagacttcgacgtagagcgtgatccgcacgcgcatgattccatccac
ttactaacccaacaaggtattgacttcgagaggaataagaaggaaggcattgactccatt
aactttgcccagctcatcatgtcttcaggtctcgtttgcaatgactctgttacctggatc
acctttcacagcgcctatgattttggttacttgattaaaatcctgactcgccgccacctt
ccgtccaatttagacgacttcttaaggctgaccagagcgtttttcgggtaccgtgtttac
gatataaagtatatgatgaagttctgtaagagcttgtatggtggcttagacagggttgct
aagactctccaagtcaagcgtgctgttggcaagtgccatcaagcaggctcggatagtttg
ctaacttggctggcgttccagaaaatggttcaactctattttctaaataatcttcccgaa
tatcacgctggtgtcatctatggattagacctctag
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