Chenopodium quinoa (quinoa): 110688277
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Entry
110688277 CDS
T05764
Name
(RefSeq) zinc finger CCCH domain-containing protein 42-like isoform X1
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110688277
Spliceosome [BR:
cqi03041
]
Complex B
Other components
RES complex
110688277
Complex C
110688277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCCH_4
zf-CCCH
zf_CCCH_4
RRM_7
zf-CCCH_2
zf-CCCH_9
Torus
RRM_5
DUF1866
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110688277
NCBI-ProteinID:
XP_021720697
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MNPLTLVKRIQSINAKEADLGISDEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
EIVDVNLVRDKATGKSKGFAFVAYEDQRSTTLAVDNLNGAQIGGRTIRVDHVAKYKKKEE
EDEETERQKREERGVCRAFQKGECKYGDACKFSHDEQRAADTGWGHEEDKRSKWDNDKSS
YPRGERGVCRAFQKGDCKYGDSCKFSHDEQRAADTGWGPEEDKKSKRVNDKYDNHSKDYK
RSRDAPPSHGPERKKPDVYGGRSSGGKDHIEIADKKVEDGFDTRDRGKRSEYKDDRDKRT
VERLRYESESKSRDDYDRRGEKWSRRSDTQPSVRDTRSEKDWDRDRDRDREKRSSYTRDS
SPQRHRDRDDGDQRRARRDEDYHRSQRK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattaacattggtgaagagaattcaaagtataaatgctaaagaagctgattta
gggatttcagatgaagcttcatggcacgccaagtataaagattctgcttacgttttcgtc
ggcggcattccttacgatcttaccgaaggcgatcttctcgccgtctttgctcaatatgga
gaaattgttgatgttaatcttgtacgagataaagccactggaaaatcgaaaggttttgca
tttgttgcgtatgaggatcaaagaagtacaactctagctgtagataatttgaatggtgct
caaattggtggcagaactattagagttgatcatgttgctaagtataagaaaaaagaagag
gaggatgaggagacggagaggcagaagagggaagaacgaggagtttgtcgtgctttccag
aaaggcgagtgtaaatatggtgatgcgtgcaaattttctcacgatgagcaaagagctgca
gatactggatggggtcacgaagaagataaaaggtcaaagtgggataatgacaaatcatcc
taccctaggggagaacggggtgtttgtcgtgctttccaaaagggcgattgtaaatatgga
gattcgtgcaaattttctcacgatgagcaaagagctgcagacactggatggggtcctgag
gaggataagaagtcaaagcgggtgaatgacaaatatgacaatcattcaaaggattataaa
agatcacgggatgctccacctagtcatggtccagagcggaaaaaacctgatgtttatggt
ggaagaagttctggaggaaaggaccacatcgaaattgctgacaagaaagttgaagatggt
tttgacacaagagacaggggcaagcgatcagaatacaaagatgatcgagacaagcgaaca
gttgaaaggttgaggtatgaatctgaatcaaaatctagagatgattatgacaggagggga
gaaaaatggtcaaggaggagtgatacacaaccttctgtgagggacacccgaagtgagaaa
gactgggatagagatagggatagggatagggagaagcgctcatcctatactagggattct
tcccctcaacgtcatagagacagggatgatggtgatcagcgtcgagccagacgtgatgaa
gattaccatagatctcagagaaaatag
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