KEGG   Chenopodium quinoa (quinoa): 110688352
Entry
110688352         CDS       T05764                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03020  RNA polymerase
cqi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110688352
  09124 Replication and repair
   03420 Nucleotide excision repair
    110688352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqi03021]
    110688352
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110688352
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110688352
Transcription machinery [BR:cqi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110688352
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110688352
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110688352
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 110688352
NCBI-ProteinID: XP_021720786
LinkDB
Position
Unknown
AA seq 177 aa
MFFHIILERNMQLHPRHFGARLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIEHVGKGLIR
DGTGFVTFPVKYKCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQVFVSNHLIPDDMEFQ
SADTPNYTTSDGSVKIQKDTEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGATS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatcatactcgagagaaatatgcagcttcacccccgccacttcggcgcg
cgccttcgcgataaactcgtctccaagcttatgaaagacgtcgagggtacttgcagtggg
cgtcatggatttgtggtggcaatcatgggaattgagcatgttggcaagggtttgataagg
gatggaactgggtttgttactttccctgttaagtataaatgtgttgtatttcgtcctttt
aagggtgagattcttgaggctgttgttactatggttaataagatgggtttctttgccgag
gctggtcctgttcaggtttttgtgtctaatcatctgataccagatgacatggagtttcaa
tctgctgatacaccaaattatacaacttcagatggatcagttaagattcagaaagacact
gaagtgcggttgaagattattggaactcgagttgatgccacagaaattttctgcattggt
acaatcaaagatgattttctgggcgtgattagtgaccccggtgctacatcgtag

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