Chenopodium quinoa (quinoa): 110688360
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Entry
110688360 CDS
T05764
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110688360
03015 mRNA surveillance pathway
110688360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110688360
03041 Spliceosome [BR:
cqi03041
]
110688360
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110688360
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110688360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
110688360
NCBI-ProteinID:
XP_021720796
UniProt:
A0A803KRS9
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFAPELEHLVDISKVKMDVIKPWIAKRVTELL
DGFEDEVLINFINGLLEGKVVNGKQIQIQLTGFMEKNTGKFMKELWSLLLSAQKNASGVP
QQFLDAKEEETRKKKEENDRIFNEIQRRKEKEGEDSEQEKVRQMDDGLGKYSNDESNRRR
ERGSGVQSEDENGADVRNGFGGRSRASKSPSDQSQSPHRERSVSRSVSGSPRAKRQLVSS
GRRHHSPRRSVTPRRRSTRESVSPRRRSLSRRQSPSRTRYRSPSPVRRRFCSPARRRSPS
PIRRMSPSPARRRSPSPLRRRSRSPLRRRSPSPRRRRSPSPWRRRSPSPRRRRSPSPVHR
RRRRSSSSPRSRSPGLRRSPSPIRRRFQSPVRRPFPVRRRSPSPARRRSPSPARRRSPSP
ARRRSPMARGYRSPPPVEHRSLAPVRRKSPVPARRRSPTPSPSRSPLPASQSSRSPVRHI
SASQVKTRSPRIQNSPHGSPRDRNSDHEPAMMARRQPISLSPQRDNRKRSPRNVPSVSPP
PEKSNAVSPLARKKSSVEDGRPASPYDSPVKKSEDKTTLNGNRSPSRLRGHKVRHGSLET
SGDRFDNDREYQADKYKLEEKNSGRSSAGKQRDSPDRSVRYQHRGNVGARQDDEITSEEA
SLKEVRALKKSPPRGGTVSDERSDMLYPGDVSKLNEKRNYQQKDTRDNTVSDSVVKLHNK
RRSPSVDSESGSEESEKHKAEVSEKRKHRRSRRREVASDDTSSESEMEDRKEAKRRKKEE
KKIRKEERRRRREERRRRKEEKRAGKRKQKSKDADALSSDVENNEKDTNAANGERRTKKY
SSDEEETESQKKRLEIELREKALESLRAKKGISR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggcacgtcagctgagcaagacactcggttctcaaacaag
caagcaaagttgctcaaaacgcagaagtttgctcccgaactcgaacatttggttgatatt
tcaaaagttaaaatggatgttattaagccgtggatcgctaaaagagtgactgaactcctt
gatggatttgaggacgaagtgctgattaacttcatcaatggacttcttgaaggaaaggtt
gttaatggaaagcagatccaaattcaactaactggtttcatggaaaagaatactggtaag
ttcatgaaagagctttggtcgcttcttctcagtgcacagaaaaatgctagtggtgtaccc
caacaattcctggatgctaaggaagaggaaactaggaagaaaaaggaggagaatgatcgt
atctttaatgaaatccagagaaggaaagagaaggaaggagaagattctgagcaagagaaa
gtgaggcaaatggatgacgggcttggaaaatattctaatgacgaatcaaatagaagacga
gaaagaggttctggtgtgcaatctgaagatgagaatggagctgatgtgagaaatggtttt
ggaggaaggtccagagcatccaagtcaccatctgatcagtctcaatcacctcatcgagaa
agaagtgtatcgcggagtgtttctggttctcctagggcaaaaaggcaattggtttcttct
ggaagaagacatcattcgccccgaagatctgtcacacctaggaggcggtctacccgggag
tcagtttctccaaggcgtaggtctctttctagaaggcagtctccatctcgtactcgttat
aggtctccatctcctgtgaggcgccgattttgttctccagcacgcagaaggtcaccatct
ccaattcgacgcatgtcaccttctcctgccagaagaagatcaccatctcctttaagacgt
cgttctcggtcacctttacgacgtcggtctccttctcctagaaggcgtcgatcaccttct
ccgtggcgtcgacgatcaccatcccctaggcgacgcagatccccctctcctgttcatcgc
cgtaggaggaggtcctcttcaagtccgaggtctcggtccccaggtctgcgtaggtctcca
tctcctattcgacgtaggttccaatcccctgtcagaaggccttttccagtccgacgtagg
tctccatctcctgcacggcgtaggtctccatctcctgctcgacgcaggtctccatctcct
gctcgacgtaggtcccccatggcaaggggataccgttctccacctccagtggaacataga
tctttagctccagttcggagaaagtcacctgttccagctcgtaggcgatcacctactcca
tcaccaagcagatctccgttgcctgccagtcaaagttccagatcacctgtcaggcatatt
tctgcttcacaagttaagacgagatcacccagaattcagaattccccacatggatcccct
agagatcgtaacagtgatcatgagcctgcaatgatggctcgtagacagcctatttcattg
tccccccagagagataaccgaaagcgttcacccagaaatgtgccgtctgtctcacctcct
ccagagaagtcaaatgcggtttcaccactagcccgcaaaaagagttctgttgaagatggg
aggccagcgagtccatatgacagtcctgttaaaaaatcagaggataaaacaacccttaat
ggaaatcggagtcctagtagattgagaggccacaaagttcgtcatggaagcctagaaacg
agtggagatagatttgataatgacagggagtatcaggcggacaagtacaagttagaagaa
aaaaattcaggacgctcatcagctggcaagcagagggattctcctgatcgatcagttaga
taccaacatcgtggtaatgttggtgcaagacaggacgatgagataacaagtgaagaagct
tctttgaaggaagttcgtgctctgaaaaagtcaccacctagaggtggaactgtatcagat
gagaggtctgacatgttgtatcctggggatgtttccaagttgaatgaaaagaggaactac
caacagaaagatactagggacaacactgtgtctgactccgtagtgaaattacataataaa
cgaagaagtcctagtgttgactctgaatctggatctgaggaaagtgagaagcataaagct
gaagtttctgagaagaggaagcatcgaaggtcaaggcgaagagaagtggcatctgatgac
actagttctgaatctgagatggaggataggaaagaagctaagagaagaaagaaggaagag
aagaaaatacgaaaagaggagcggcgtaggcgtcgtgaggagcggcgccggaggaaggaa
gagaagcgtgctggtaaacggaagcaaaagtcaaaagatgctgatgccctgtcttctgat
gtggaaaacaatgagaaggataccaatgctgcaaatggtgaacgtcgtacaaagaagtat
tcaagtgatgaagaagagacagaatcgcagaagaagaggcttgagattgagctacgtgaa
aaggctcttgagtcactgagagcaaagaaggggattagtcgttga
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