Chenopodium quinoa (quinoa): 110689173
Help
Entry
110689173 CDS
T05764
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110689173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110689173
03041 Spliceosome [BR:
cqi03041
]
110689173
03036 Chromosome and associated proteins [BR:
cqi03036
]
110689173
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110689173
Spliceosome [BR:
cqi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110689173
Complex B
110689173
Complex C
U2 SnRNP specific factors
110689173
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110689173
TFTC complex
110689173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110689173
NCBI-ProteinID:
XP_021721595
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MAVTEAESSSSSTPASNSEFQPSNGAHYLAKCVLPGSVVLQVVQGHIRSPSSNDIVFGKE
TSIELVEMSEDGVVQSICEQPVFGIIKDMAILPRTKKLRTHNSQVMGKDMLLIISDSGKL
SFLTFCNEMHRFFPVTHVQLSIPGNSRHQIGRMLAVDALGCYIAVSAYEERVALFSVSQS
SDVDMIDKRISYPPEPEDDLIDIELQQTSQSILVNSLPVEEISVESAPTPPISYINGTIW
SMCFISKHSDQLSKEHNPVLAILVTRKESSLNELLLLGWDVRENTIHILSRFVESGPLAR
TIAEVHGSPGLALLFRVGDILLMDLSDACNPFCVQRTDLSTPINPSEEKSCMEDPFKMQD
GDDEGFIAARALLELQDYGMDFNKGNDPMSIDADVHSAKSVPMFVSSWSWEPGTNTKPRM
IFSVDTGEYFYIEITFGPDGPEVLLSHCLFVGLPSIALLWTTGGYLAAIVEMDDGMVLKL
ADVGEMKDEYLAYVGPIQNIAPILDMSVMDYHDEKQDQMFACCGVAPEGSLRIIRNGASL
ERLVRTAPIYEGITAIWTVKMRIKDSNHSFLVLSFVEETRVLSVGVSFTDVTESVGFQPD
VCTLACGLVVDNVLVQIDQNYVRLCLPTSVAHPDGIPMSSPTCTSWSPDKVGISLGAVGH
NMIIVATANPCFLIILGVKLLSLYDYEIYEMQHVRLQSELSCISIPQMHSIRRDSGPIPV
GFDIGNTFVIGTHKPSVEILSYVHGQGIRVLAAGMISLTNMTGTAISGCIPQDVRLVLVD
RLYILSGLRNGMLLRFEWPTTSWESDLPCYRTTLCSKSGLLKASAPAILGPQLSGVNSYE
RPKDNDPVHLLLIAIRRIGITPVFLVPLSESLDADVIALSDRPWLVQAARHSLSYISISF
EPSTYVTPVCSAECPKGLLFVAENCLHLVEMVHSKRLNVQKFHLGGTPRKVLYHSESRLL
LVMRTDLDIDPFSSDICCVDPLSGSVVSAFKFDVGETGKCMEFVQVGNQQVLLVGTSLSS
GPAIMPSGEAESTKGRLIMFRLEHSHNSDSGSMTMRLKSSSSTQHISPVCEAAGYTAERM
SNSSRCSSPEDNSCDEVKLEDSEAWQLEFLSAITWPGVVLAICPYLDEYFLASSGNAFYV
CGFQNDNPKRLKRYAVERTRFMIVSLTAYFTRIAVGDCRDGVLFYDYHETAKKLEQIYCD
PGQRLVADCLLTDTSTAFVSDRKGSIAVLTSSTHFEDNASPECNLTVSCSYYTGEIAMSI
KKGSFSYKMPAEDGFKGCDGGNSVVDLSRNGIMASTLLGSILIFIPISREEYELLKPVQA
RLAVHPLTAPILGNNHSEFRSRENQVVVPTMLDGDMLAQFLELTSIQQEAVLGLPCATAE
VSSSSRSPHSPVSVDQVVQLLERVHNVLN
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcactgaagcagaatcatcatcatcttcaacaccagcatcaaattctgaattt
cagccttctaatggcgctcactaccttgctaaatgcgttcttccgggctccgttgttctt
caagttgttcaaggccatattcgttctccttcttccaatgacatcgtttttggcaaggag
acatctattgagttggtagaaatgagtgaggatggcgtggtacaatctatctgcgagcaa
ccagtatttggtataataaaagacatggctattctacccaggactaagaaacttcgtaca
cataactcacaggttatggggaaagacatgttgcttatcatttccgattctggaaagctc
tctttcctaacattttgtaatgaaatgcacaggttctttccagtgactcatgttcaactt
tcaatccctggcaactcaagacaccagattggtagaatgcttgctgttgatgccttaggg
tgttacattgccgttagtgcttatgaagaacgtgttgctcttttttctgtttcacaatca
agcgatgttgatatgattgacaagcgaataagttatcctcctgaacccgaggatgatttg
attgacatagaactccagcaaaccagccagtctatcttggttaattcattgcctgtagag
gaaataagtgtagagtctgctccaacacctccaatatcatatataaatggaactatttgg
agcatgtgctttatttcaaagcattctgaccaattgagcaaggagcacaatcctgtacta
gcaattcttgtcaccaggaaggaatcatccttgaatgagctgcttcttttgggttgggat
gtcagagagaatacaatacatattctttctaggtttgtggaaagtggacccttagctcgt
actattgctgaagttcatggatctccgggacttgcattattatttagggttggtgatatc
ttacttatggatcttagtgatgcttgtaatcctttttgtgtgcaaagaacagacctgagt
actccaatcaacccaagtgaggagaagagttgtatggaagaccctttcaagatgcaggat
ggtgacgatgaaggtttcattgctgctcgtgctttgctagagttgcaggattatgggatg
gattttaataagggtaatgatcccatgagcattgatgcggatgtgcacagtgctaaatct
gtacctatgtttgtaagttcatggagttgggaaccaggaacaaatacgaaaccaaggatg
atattttcggtggatacaggggaatatttttatattgaaatcacttttggccctgatggt
cctgaggtcttgttatctcattgtctttttgttggtcttcccagtatagcattattatgg
accactggtggctatttggcagcaattgtggagatggacgatggcatggtcctaaaattg
gcagatgttggtgaaatgaaagatgaatatctggcttatgtaggtccgattcaaaatatt
gctcccatcctagacatgtcagtcatggattatcacgatgaaaagcaggatcaaatgttt
gcttgctgtggagtggctcctgaaggatcattgaggataatcagaaatggtgcaagtctg
gaaagattagtaaggacagctcctatatatgaaggaataactgctatatggactgttaag
atgagaataaaagattcaaatcactcttttcttgtgctttcttttgttgaggaaaccagg
gtgttgtcagttggtgtaagcttcactgatgtaacagagtcagttggttttcagcctgat
gtctgtacattagcatgtggtcttgttgttgataatgtattggttcagattgatcaaaat
tatgtcagactttgcttgcctacttcagttgctcatccagatggtattccgatgtcttca
ccaacatgtacttcctggtctcctgataaagttggtattagcttgggagctgttggacac
aacatgataattgttgctactgcaaatccttgtttccttataattcttggtgttaaattg
ctatcattgtatgactatgaaatatatgagatgcaacatgttagacttcaaagtgaattg
tcttgcatatctattccacaaatgcacagtataagaagagattctggtcctatcccagtt
ggatttgatatcggtaatacatttgtgattggtacacacaagccatctgtggaaattcta
tcttatgtgcatggtcaaggaatacgagttcttgccgctggaatgatatcattgacaaac
atgactggtaccgctatcagtgggtgtattccgcaggatgtaaggcttgtgctggtagat
aggctgtatattctctctgggttaagaaatggaatgttgttacgctttgagtggcctaca
acatcctgggaatctgatctaccctgttataggactactttgtgttcaaaatctggtttg
ttaaaggcatcagctccagccattcttggtccacagcttagtggtgtcaactcctatgaa
aggccaaaggataatgatcctgttcatctcctattaattgctattcgtcggattggtatt
acccctgttttccttgttcctctcagcgagtcattagatgctgatgttattgctctcagc
gacaggccttggttagtccaagctgctaggcacagcctttcatacatttcaatctcgttt
gaaccttcaacttatgtgactcctgtatgctcagctgaatgtccaaagggacttctattt
gtagcagagaactgtctacatctggtagagatggtgcatagtaagaggcttaatgtgcag
aaatttcatcttggtggaactccacgaaaggtcttgtatcatagtgagagcaggttgctg
ctcgttatgagaactgatttggatatcgatccgttttcctctgatatttgctgtgtagat
ccccttagtgggtctgtagtctctgcttttaagttcgatgtgggtgaaactggaaaatgc
atggagtttgtgcaggttgggaatcagcaggtactgttggttggaaccagtttatcttct
gggccagctataatgcctagtggagaagctgaaagtacaaagggccgattaattatgttc
cgcctagagcactcgcacaattcggatagtgggtcaatgacaatgcgtttgaaatcgagt
tcatctacgcaacatatttcgccagtttgtgaagctgctggatacactgctgaaaggatg
tctaatagcagccgttgcagtagcccagaagataatagctgtgatgaagtgaagcttgaa
gattctgaagcttggcaactagaatttcttagtgcaattacttggcctggagtggtgctt
gcaatatgtccttaccttgatgagtacttcttagcttcttctggcaacgctttctatgta
tgcggctttcaaaatgataatcccaagagacttaaaaggtatgctgttgaacgaacgcgg
tttatgatagtctcattgacagcttacttcacaaggattgctgttggtgactgtcgtgat
ggtgtgctattttatgattatcatgagactgcaaagaaactggagcagatctattgtgat
cctggtcagaggttagttgctgattgtctccttactgataccagcactgcctttgtttcg
gatcgtaagggaagcattgctgttctaacatcctcaactcattttgaagacaatgcgagt
cctgaatgcaacctaacagtgagctgttcatattatacaggcgagattgcaatgagcatc
aagaagggatcattctcttataaaatgcctgctgaagatggatttaaagggtgtgacggt
ggtaatagtgttgttgatttgtcgcgcaatggtatcatggccagtactctacttggaagc
attttaattttcatccctatatccagggaggaatatgagcttttgaagcctgtacaagcc
agacttgcagttcatcctcttactgctcctatacttgggaacaatcatagcgagtttcgt
agtcgtgagaaccaggttgtggtgcctacaatgcttgatggagacatgttggctcagttt
ttggagcttacaagcatccaacaagaagctgtgttgggattaccttgtgcaactgccgaa
gtgtcatcaagctccagatcacctcattcacctgtatcagttgaccaggtggtgcaactc
cttgaacgagttcacaatgtacttaactga
DBGET
integrated database retrieval system
