Chenopodium quinoa (quinoa): 110689285
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Entry
110689285 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: N-glycosylase/DNA lyase OGG1-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110689285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110689285
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110689285
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110689285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
110689285
NCBI-ProteinID:
XP_021721726
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MKRRRSFSSPGSAVKCTAPSTPPTPRNVDTTQFAKTKTNLNSETLSHSSNRPPKRSLSRI
LKIQNLPTDKWVPLDLGKRELSLPLTFPTGQTFRWKKTGTLQYTGVVKSHLVSLKHLENG
DVAYQFHPLTCSTSNFTEEEDAKLALLDFLNVXYSSADLWESFAASDQRFSELAPHLAGA
RVLRQDPLECLIQFLCSSNNNIQRITRMVDYISSLGHHLGSVEGFQFYQFPSLERLAMIS
EEELREAGFGYRAKYIVGTIKALQLKPGGGVEWLSSLRELDLNEVINELSTFPGVGPKVA
SCIALFSLDQHHAVPVDTHVWKVATRYLMPELAGVRITSKMCSSVAEAFVAKYGKYAGWA
QTLLFVSELPSQKAIIPSEVCNMKENNLLDKKVF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaggagatccttttcttctcctggttctgctgttaagtgcacagctccctca
acccctccaactccgcgcaatgtggacaccacccagtttgctaaaaccaaaacaaacctt
aactcagaaactttgtctcactcttcaaatagaccgcctaagagatctttgtctcgaatt
ctgaaaatccaaaacttgccaactgataaatgggtgccccttgatttggggaaacgagag
ctgtctttgcccctgacttttccaactggacagaccttcaggtggaagaaaacagggaca
ctacaatacactggagttgtcaagtctcatttggtgtccttgaagcaccttgaaaatggt
gatgtcgcttaccaatttcatccacttacctgttctacttccaacttcactgaggaggag
gatgctaagctagctttgcttgattttctcaatgtgnggtattcgtctgctgatttgtgg
gagagttttgcagcctccgatcagaggttttctgagctagcaccccatttagctggtgcc
cgtgtgcttaggcaggatcctttggagtgcctcattcagtttttgtgttcgtctaataat
aacattcaaaggatcactcgaatggttgactacatttcttctttaggtcatcatttgggg
agtgttgaggggtttcaattttatcaatttccatcattggagcggttggccatgatctct
gaagaggagctaagggaggctggctttggttatagagcaaaatatatagttggcacaata
aaagccctgcaattgaagcctggtggtggtgttgagtggctttcttctttgcgtgaattg
gaccttaatgaagtcataaatgaactctccacttttcccggtgtgggtccaaaggtggca
tcatgtatagctctcttctccctggatcaacatcatgcagttccagttgacactcatgtc
tggaaggttgctacaaggtaccttatgcctgagcttgcaggtgtccgtattacatcaaag
atgtgcagcagtgtggctgaagcatttgttgcaaagtatgggaaatatgctggctgggca
caaaccctactttttgtctctgagttgccctctcaaaaggctatcataccatcagaagtt
tgcaatatgaaagagaataatctgttagacaaaaaagttttttag
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