Chenopodium quinoa (quinoa): 110689713
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Entry
110689713 CDS
T05764
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110689713
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110689713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
UTP6_C
TPR_12
NRDE-2
TPR_7
YmiD
DNAX_ATPase_lid
TPR_10
Motif
Other DBs
NCBI-GeneID:
110689713
NCBI-ProteinID:
XP_021722185
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MGDSEAVVAQPPTVMSDTSNMYPSSDPMDVKLSAPEDAAIPVSAEDLAEANANSDAMNSD
IDPTSKPSIGEDVNPASVAGESTSMEPNQAAVYDASANGVVDGLSNGNATGLHEVQATTV
EQQFEDGSALSAEEERLWSIVKTNSLDFNVWTSLIEETERVAQDNILKIRKVYDAFLAEF
PLCYGYWKKYADHEARFGDINKVVEVYERAVQGVTYSVDIWLHYCVFTITTYGDPDTVRR
LFERALAYVGTDYLSYPLWDKYIEYEYTQQQWAHLASIYTRILENPNQQLDRYLTSFKEL
AGSRPLAELRTTEEAAAAAAAAAITASSDTDVQESDKDGNPDTMEESSKPVSSGLTEAEE
LEKYIAIREEIYKKAKEADSKIIGFETAIRRPYFHVRPLNDAELENWHNYLDFIEVEGDV
NKIFKLYERCLVACANYPEFWIRYIMFMEGSGSIDLADNALARATQVFVKRQPEIHLFAA
RIKEQRGDVPGARGAYHLVHTEISPGLLEATIEHANMERRLGNMEDAFSLYEQAIAIEKG
KEHSQSLPMLFAQYSRFVYLVYGNAEKARDILVGALDHVQLSKPLLEALIHLESIQSLPK
QIDYMDSLVDKYLAPVPDSSDAASILEREELSSIYMEFLDLFGDVQSLKKAKDRHAKLFL
RHRRPSESRKRSADDFLTSDKAKLAKSYSGVPSTAPATYSAAQTQWAAGYGTQAQPWPQA
AQTAGQPYNSTYPQQAAYSGYYGNSYAPQPVPASAPQTAAYGAYPSTYPAQQAYPQQPYV
APVAPVAAAPAPAPAPAPAPAQSGAVPQAYYGTYY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagtgaagcagttgttgctcaaccacctactgttatgagtgatacgtcgaat
atgtatccttctagtgatcctatggatgttaagttaagtgctcctgaggatgctgctatc
cctgtgagcgctgaagatttagcggaggcaaatgctaattcagatgctatgaattcagat
attgatccaacttcgaagccttctattggagaagatgtgaacccggcttctgtagcaggt
gaaagcacttccatggaaccaaaccaggcggctgtttatgatgcaagtgctaatggggtg
gttgatggtctttcaaatggaaatgcaactggcttgcatgaggtgcaagcaacaacagtt
gaacaacagtttgaggatggttcagctttatctgctgaagaagaacgtttatggagcata
gtcaaaaccaattctttagatttcaatgtatggacgtcactaattgaagaaacagaaagg
gtggcacaggacaatatcttaaaaattagaaaagtgtatgatgcttttctcgcagagttt
cccttgtgttatggttattggaagaagtatgctgatcatgaagcgcgatttggagatatt
aacaaagtcgtggaggtgtatgaacgagccgttcaaggggtgacatattctgttgatatc
tggctgcattattgtgtgttcacaattaccacatatggagaccctgacactgttagaagg
ctgtttgagcgagcattggcgtatgttggaactgattacctatcttaccctctttgggat
aagtatattgaatatgaatatacacagcagcaatgggcacatcttgcatcaatatatacg
aggatattggagaatcccaatcaacagttagatcgctatttaacaagtttcaaggagtta
gctggcagccggcctctggcagagcttagaactactgaagaagcagcagcagcagctgct
gctgctgccattactgccagttcagatactgatgttcaagaatctgacaaggatggtaat
cctgatacaatggaagaatcttctaaacctgtaagttctggattaacagaagctgaagaa
ttggagaagtatatcgcaattagagaagagatatataagaaagctaaggaggccgattct
aagatcattggttttgaaacagctattagaaggccgtactttcatgtacggcccttgaat
gatgcagaactagaaaactggcataactatctggatttcattgaagtagaaggggacgtc
aacaagatcttcaagctatatgaaagatgccttgtagcatgtgctaattatcccgagttt
tggatacgatacattatgtttatggaaggaagtggaagcattgatcttgctgataatgca
cttgctcgtgctacccaagtttttgtgaagaggcaacctgagattcacctttttgctgct
cgcattaaagagcaacgtggtgatgttcctggagctcgtggtgcctatcatcttgtccac
actgagatctctcctgggcttttggaggccaccattgaacatgcaaacatggagcggagg
ctgggaaatatggaagacgctttctcattatatgaacaagctattgccattgagaaagga
aaagaacattctcagtccttaccaatgttgtttgcccagtattctcggtttgtttatctg
gtttatggaaatgctgaaaaagctcgagatattcttgttggagctcttgatcatgtccaa
ttgtcaaagccacttttggaggcattaatacatttggaatctatccagtcactcccaaaa
caaattgattatatggattctttggttgataagtacctggctccagtgcctgatagttct
gatgctgccagtatacttgaaagagaagaattatcaagcatatatatggagtttctggat
ctatttggggatgtacaatccttaaagaaggctaaagatcggcatgctaaactgttcttg
cgccacagaagaccatcagagtcgagaaagcgtagtgctgatgattttttaacttcagac
aaagcaaaacttgcaaaatcatactctggtgttccctcaacggccccagcaacatattca
gctgctcaaactcaatgggcagcaggttatggaacacaagctcaaccatggccacaagct
gctcagactgcaggacaaccatataactccacctatccccaacaggctgcatatagtgga
tactacggtaacagctacgcccctcaaccagtccctgcatcagcacctcaaactgctgca
tatggtgcctacccatcaacttatccagcacagcaggcttaccctcaacaaccatatgtg
gcaccagtggcaccagtagctgcagccccagccccagccccagccccagccccagcccca
gctcaatctggtgctgttcctcaagcatattatggtacttactattga
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