Chenopodium quinoa (quinoa): 110689800
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Entry
110689800 CDS
T05764
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110689800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110689800
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110689800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF7059
Motif
Other DBs
NCBI-GeneID:
110689800
NCBI-ProteinID:
XP_021722299
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSERNHEKGRSSRREKRRFEDDESNGRFKEEEVQVKKDEEGGGGRDGGDYSNSDRKKRAR
RRFEDGESVAEPSNRSGSRPNDGAEESLNVSSRFPSESFSANNHTATKVSSISTTNENKG
VNITGSHEVTGKSSTDGTPSTAGKSGNISLDALAKAKKALQMQKELAEKWKKIPLSNKGT
SSTNVVSSQGGSKEENKFSNAAGIQRTPPNIPPAASSAKTVGMIDPAKYEAVKRAQELAA
KMGFRQDTEFAPLINLFPGQLPPDAAALQKPAKAPVLRLDAFGREIDEHGNVVNISKPSS
LSTLKVNINKQKKDAFQIHKPELEVDPEKNPHFDPRMGIDKTKLLRPKRMSFQFVEEGKW
SKDAEIIKLKSQFGEAQAKEHKAKQAQLAKAKAEPNINPNLIEVSERVITKEKPKESIPE
VEWWDVPLLRSGDYADIADGSTIEDRVKMEKITMYVEHPRPIEPPAEPAPPQPQPLKLTK
KEQKKLRTQRRLAKEKERQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRT
AAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNTLETIVSVYKINDLSHPKNRFKVD
INAQENRLTGCAVISEGFSVVVVEGGSKSIKRYGKLMLRRIDWAAKLENEDEEEDDDEEK
PPNKCVLVWQGSVAKPCFNRFFIHDCRTEAAARKVFFDAGVGHYWELAANFVDDQI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgaaaccatgagaagggacgatcttcgaggagagagaaaagaagatttgag
gatgatgaaagtaatggtaggtttaaggaagaagaagttcaggtgaagaaagacgaagaa
ggcggtggtggccgcgatggcggcgattatagtaatagtgataggaagaagagggctagg
aggagatttgaggatggtgaatctgttgctgagcctagtaacaggagtggttcccgtccg
aatgatggggctgaggaatcactcaatgtgtcatcaagatttccatcggaatctttctct
gctaataaccatacggccaccaaggtatcttcaatttctaccaccaatgaaaataaggga
gttaatattaccggatctcatgaggttactggaaaatctagtacagatgggacaccttca
actgctggcaagagtggcaatatttcccttgatgctttagcaaaagctaagaaagcttta
cagatgcagaaggaactcgctgaaaaatggaagaagattcctttgtcaaataaaggtact
agctcaacaaatgttgtcagctcacaagggggctctaaagaagaaaataaattttctaat
gctgctggaattcagcgtacaccacctaacattcctccagctgcttcttctgctaagaca
gttggcatgatagaccctgccaagtatgaagctgtgaagcgtgctcaggaacttgctgcc
aagatgggcttccgccaggatacagaatttgctcctttgattaatttgtttcccgggcag
ttgccacctgatgctgcagcacttcaaaaacctgcaaaggctcccgttcttcgattggat
gcttttggtagggaaattgatgagcatggaaatgttgtcaacatatctaaaccaagcagt
cttagtactcttaaggtgaacattaacaagcagaaaaaagatgcattccagattcacaag
ccagaattggaagttgatccagagaagaatccacatttcgacccaaggatgggtattgac
aaaaccaaacttcttaggcccaagagaatgagtttccagtttgttgaggaaggtaaatgg
tccaaagatgctgaaattatcaaactgaagagtcaatttggagaagcccaagccaaggag
cataaggctaagcaggcacagctggctaaggcaaaggcagagccgaacataaatccaaat
ttgattgaagtttcagaaagagttattacaaaagagaagccaaaggagtcaattccagaa
gttgaatggtgggatgtgcctcttctgcgttctggtgattatgctgatattgctgatggt
agcaccattgaagatagagtaaagatggagaagatcacgatgtatgttgagcacccccgt
cctattgagcctcctgcagagccagcccctcctcaacctcaaccgctgaaacttactaag
aaggaacagaagaaactccgtacacagcgtcgcttggccaaggagaaggaaaggcaggag
atgattaggcaaggtttaattgagccccccaaacctaaagttaaaatgagtaacctcatg
aaggtgttgggctctgaggcaactcaagaccccacaaaattggagatggaaattcgaact
gcagcagctgagcgtgagcaggcccatgtggacaggaacattgctcgcaaactcacacct
gctgagcggcgtgaaaagaaagaaaggaagctgtttgatgatccaaataccctggaaact
atcgtatcagtttataagatcaatgacctttcacacccaaaaaatcggtttaaagttgac
attaatgcacaagagaatcgtttaactggttgcgctgtcatttctgagggttttagtgtt
gtggtcgttgaaggtggaagcaaatccattaagaggtatgggaagctgatgcttcggcgg
atagattgggctgccaagctggaaaatgaggatgaggaggaagatgatgatgaggaaaaa
ccaccaaataaatgtgttctcgtgtggcaaggaagtgtggcaaaaccttgttttaatcgg
ttcttcatccatgattgcagaactgaggctgctgcccgcaaagttttttttgatgctggt
gttggccactactgggagttggctgcaaactttgtggatgaccagatatga
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