Chenopodium quinoa (quinoa): 110689995
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Entry
110689995 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110689995
KO
K06100
symplekin
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110689995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110689995
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110689995
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110689995
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110689995
U7-dependent histone pre-mRNA processing factors
110689995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
110689995
NCBI-ProteinID:
XP_021722508
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MEEVGLRVLEHSYMQVPVLLAQLKDEDPGVACQAFVSGTKFFYSTLQELARQFHRHDKVE
RWVEETWMQMIEFKDAVFSLVFEAAAVRTRLLALKFLETCILLFTPDAVNTDRLTSGGKE
HSFNISWLASDHPVLDPAKLASEANRLFTSLLDMLQSSSSIPGPLTITIVNCLASIARKR
TEHYGHVLSALLDFRSRSETRSGHAASLQYSVRSALLGFLRCTHPVFIESRDRLVQELRS
MNAGDAVDQVLRQVDKLMRNNERIARDARVVKEEQSSAQLPLSGDPIKRKLLPVDNEELD
NDLEMPSKRLRYTSNGRSPDLVQIHGSADDNPVINGIPSEAPLVDNDVNPVEQMITVIAA
LLAEGERAAESLELLISQIHPDLLADIVITNMKHLPKTAPLAKQGTVPSNAQSISAVSAA
QSTESTLPVLPSLSAQQGSIPAAVTFSTPPPDYSGSATLQVDSRRDPRRDPRRLDPRRVA
VPSEAPLLPLAEEATHVSSISEGPAFVNRTTLLTSAPITEHISSQFVPDAEVDVKSLTLL
VPENEVMPKEEEADESREILPSSDVNVLVNHVLSPDHAVNESPITLTSLKIEPTDAACTS
YVQESDEDSPPVSNTSACEETCEDLPEVPSYVYLTEKQRQTIKKLAVERIVKSYKQIKDQ
EYCRTRISLIARLVSWMEADDLVIVMVQQDVVLDYKDQQGHDLVMHILYHLHGLITTEGE
QSPGAADLYEKFLLGVAKSLLDTLPASDKSFSRLLGEAPMLTDSIMRLLESLCYPDGSDM
RGKDVRDDRVTQGLGAVWSLILGRPLNRLACLSIALKCAVHSEDDTRAKAIRLVSNKLYQ
LNYVSETIEQYAKNMLLSAVDCTTDADASESICLRREAGVGEETSISGPQLIDSGISHAV
SQAGASMSFPEAQRLISLYFSLCTKKPGLLQLVFDVYARAGKIVKQAIHRHIPILLRALG
SSYSQLLRIISDPPMGSENLLMLVLQILAEQTTPPPDLISTVKHLYETKLKDATILIPML
SSLSKNEVLPIFPRLVDLPLDKFQQALAHILQGSAHTGPALTPAEVLVAIHDIVPEKEKI
ALKKVTDACTACFEQRTVFTQHVLAKALNQMVDRTPLPLLFMRTVIQAIDAFPTLVEFVM
EVLSKLVNRQIWRMPKLWVGFLKCVSQTQPHSFQVLLKLPAPQLENALNKYSNLRGPLTA
YSSQPSIKSSLPSSTLAVLGLASETHLTQPHLSTPLHTSDTSSVRGATST
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttgggttgagagtgttggagcattcttacatgcaagtgccagtcctcttg
gcgcagttgaaggatgaagatcctggtgttgcttgtcaagcttttgttagtggcacaaaa
ttcttttattctacacttcaggagttggctcggcagtttcatcgacatgataaagttgag
agatgggttgaggagacatggatgcagatgattgagttcaaggatgcggtattttctctt
gtatttgaggccgctgctgtgaggacaaggttattggcgctgaaatttttggaaacttgc
atattgctatttactccagatgcagttaatactgatagactgacctcaggaggtaaggag
catagtttcaatatctcatggttggctagtgaccatccagttctagatccagctaaactt
gcatcagaagcaaataggctattcaccagtttattagatatgttgcaatcatccagtagc
attcctggtccattgactatcaccattgtcaattgtttggcttctattgcaagaaagaga
acagagcactatggtcacgttttatctgcacttcttgacttccgttcaagatctgaaacc
agatcaggtcatgctgctagtctacagtattctgtaagaagcgccttattgggcttcctg
agatgtactcatccagttttcattgagtccagggacagattagttcaagaattgcgctca
atgaatgctggtgatgctgttgatcaagttcttcgacaagttgacaaactaatgagaaat
aatgagcgtattgctcgtgatgcccgggttgttaaggaagaacagtcatcagcccagctt
ccgctttcaggggatccaataaagaggaagcttttgcccgtggacaatgaggagcttgat
aatgatcttgagatgccttcaaaacgtttgcgttacacttctaatggaagatctcctgat
cttgttcagattcatgggtctgccgatgacaatcctgttattaatggaattccttctgaa
gctcccctggtagataatgatgtgaaccctgttgaacagatgattactgtcattgctgca
ttgttggcagaaggcgaaagggctgccgagtctcttgaacttttaatatctcaaattcat
cctgatctgttagctgatattgtcataaccaatatgaagcatttgccgaagactgcacct
ttagcaaagcaggggaccgttccctccaatgcacaaagtatttctgctgtgagtgctgca
caaagtactgagagtacattgcctgtccttccatctctctctgcacaacaaggctccatt
cctgcagcagttacatttagcacaccacctcctgattactctggctctgccactctccaa
gtggattctagacgtgatccaagaagggatcccagacgcttggatcccaggcgagttgca
gtgccttctgaagctccattgcttcctcttgcagaggaagctacacatgtctcatctata
tcggaaggtcctgcttttgttaatcgaaccactttactaacttcggcaccaatcaccgaa
cacatctcttcgcaatttgtgcctgatgctgaagttgatgtgaaaagtttaacccttctg
gttcctgagaacgaagtaatgccaaaagaggaggaagcagatgaatccagggagatatta
ccgagttcagatgttaatgtgcttgttaatcatgtactctctcctgatcatgcagtcaat
gagagccccatcactctgacatccttgaaaatagaaccaacagatgctgcatgtacttca
tatgttcaagaatctgatgaagattctcctcctgtttcaaacacatctgcatgtgaagaa
acttgcgaagacttgcctgaagttccatcttatgtttatttaacagaaaagcagagacaa
acaattaagaaactggccgtggaacggattgtcaaatcatacaaacaaataaaagaccaa
gaatattgcaggactaggatttcacttattgctcgattggtctcttggatggaagctgat
gaccttgtgatagtgatggtgcaacaagacgttgtgttggattacaaagatcagcaggga
catgaccttgtgatgcatatcttataccatctccatggtctgataactacagaaggtgaa
caatctcctggtgctgctgacttgtatgagaaattccttcttggagtcgcaaaatctttg
ctggatactctgcctgcttcagacaagtcttttagcagactgcttggtgaagctccaatg
ttgacagattctataatgagactgctggagagtctctgctatcctgatgggtcagacatg
cgaggaaaagatgttcgagatgatcgtgtcactcaaggtcttggagctgtctggagcctg
attttgggacgtccactaaatcgattggcctgtttgagtattgctctcaagtgtgcggta
cattcagaagatgatactcgcgctaaggccatccgtctggtttcgaacaaactgtatcaa
ctcaattatgtatctgaaacaattgagcaatatgctaagaacatgttgctttcagctgtg
gactgtacaacagatgctgatgcatccgaatctatttgtctgagaagagaagcaggagtt
ggtgaagaaacttctatcagtggtccccaactaatagattctggcatatcccatgctgtt
tctcaggctggtgctagcatgtcatttcctgaagcccaacgtttaatatctttgtatttt
tccctttgtacaaagaaacctggtctccttcagcttgtgtttgatgtctatgcacgagct
ggtaaaattgtgaagcaggctattcatcgccacattcctattttattgagggctctaggg
tcatcgtattctcaactgctccgcattatatctgacccaccaatgggaagtgagaacttg
ttaatgctggtgctccaaatactagctgaacaaaccactcctccacctgatcttatttct
actgtcaaacatctatatgaaactaaactgaaggatgctactatcctgattccgatgctt
tcttctctttccaaaaatgaggttttgcctatattccctcggcttgttgaccttcctcta
gacaaatttcagcaggcactggctcacatattacagggttcagctcatactggtccagca
ttaacacctgctgaggttttggttgctatccatgacattgtgccagagaaggaaaaaatt
gcacttaaaaaggtaacagatgcttgcacggcttgttttgagcaacgtactgtgttcact
caacatgtattggcaaaggctttaaaccagatggttgatcgaactccacttcctctgctt
tttatgagaactgtaatccaagcaattgatgctttccctactttggttgaatttgtcatg
gaggttctctccaaactcgtcaatagacagatctggagaatgccaaagctctgggtaggt
tttttaaaatgtgtgtctcagacgcagccacattcattccaagtattattaaagttacct
gcaccccagcttgaaaacgcactcaacaaatacagtaacctcagaggtccccttactgct
tattccagccagccaagcatcaaatcttctctaccaagttcaacccttgcggttcttggt
cttgcaagtgaaacacatctgactcagccacatctttcaactcccttgcatacctctgat
acaagctctgttcgtggggcaacatcaacatga
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