Chenopodium quinoa (quinoa): 110690046
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Entry
110690046 CDS
T05764
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110690046
09123 Folding, sorting and degradation
03018 RNA degradation
110690046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110690046
03041 Spliceosome [BR:
cqi03041
]
110690046
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110690046
mRNA cycle factors
Stress granule specific factors
110690046
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110690046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_occluded
RRM_5
RRM_3
RRM_7
MARF1_RRM1
Motif
Other DBs
NCBI-GeneID:
110690046
NCBI-ProteinID:
XP_021722566
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAQVQTPASASASAPVAGAPNGVANPNGAAGAGAAGNGGAGAAAFVTTSLYVGDLDFNVN
DSQLYDLFNQIGQVISVRVCRDLSTRRSLGYGYVNFSNPQDAARALDVLNFTPLNGKPIR
VMYSHRDPSIRKSGSGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDSNGQSKGFGF
VQFDLEEAAQKAIEKLNGMLINDKQVYVGHFVRKQERDSNLGGTRFNNVYVKNLGEATTD
DDLRKVFGEYGPITSAVVMRDADGKSKGFGFVNFDNAEDAANAVEALNGKKFDDKEWYVG
KAQKKSEREQELKGKFEQTMKEAADKYQGANLYIKNLDDTVDDEKLKEMFAEFGKITSCK
VMRDPSGISKGSGFVAFSNPEEASRALAEMNGKIIVSKPLYVALAQRKEERRARLQAQFS
QMRPIAMAPSVGPRMPMYPPGAPGLGQQIFYGQAPPMIPPQGGFGYQQQLVPGVRPGAAP
MPNFFVPFMQQGQQGQRPGGRRGAGPGQQNQQPVPMMQQQMLPRGRVYRYPPGRNMPEVP
MPGTMLPGYDMAGMPIRDTGIAQPVPITALATALANASPEQQRTMLGESLYPLVDAIEHD
NAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQQGGNPADQLASLSLND
NLVS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagttcagactccggcttcggcttcggcttcggctccagttgcgggtgctcct
aatggagtggcgaaccccaatggcgccgctggtgctggtgctgctggcaatggtggtgct
ggtgctgcggcgtttgttacgacgtcgctttacgtcggtgacctcgacttcaatgtcaat
gattcgcagctttacgatctatttaaccagattggtcaggttatttctgttagggtttgc
agggatttatcaactcgccgatctcttggatatggttatgtcaacttcagcaaccctcaa
gatgctgcacgggcattggatgtgttgaacttcactcctctgaatggaaagcctattaga
gtcatgtactctcaccgagaccctagtattcgtaaaagtgggtctggtaatatctttatc
aagaatttggacaaatccattgaccacaaagctttgcatgacacattttcttcctttgga
aacatcctgtcatgcaagatagctactgattctaatggtcagtctaagggatttgggttt
gttcagtttgatcttgaagaagctgctcaaaaagccatagagaagctaaacgggatgctg
atcaatgataaacaagtgtatgttgggcactttgttcgtaagcaggaaagagattccaat
ttgggtggaacaagattcaacaatgtgtatgtgaagaatttgggcgaagcaactaccgat
gatgacctgagaaaagtttttggtgaatatggacctataaccagtgctgtggtgatgagg
gatgcagatgggaaatcaaaaggttttggatttgtgaactttgataatgctgaagatgct
gccaatgcagttgaggcattaaatggtaagaaatttgatgacaaagagtggtatgttggg
aaggcacagaagaaatctgaaagggagcaggagctgaagggaaagtttgagcaaaccatg
aaggaagctgctgacaagtaccagggtgccaatttgtacatcaagaacttggatgatact
gttgatgatgagaagcttaaggagatgtttgcagagtttggaaaaattacatcttgcaag
gttatgcgtgatcctagcggaataagtaagggatctggctttgtggcattttcaaacccc
gaagaggcatcccgagctcttgccgagatgaatggaaaaattattgtcagcaagcctttg
tatgttgccctagcgcagcgtaaagaagaaagaagagctcgcttgcaggctcagttttcg
caaatgaggccaatagctatggcaccctctgttggtccccgaatgccaatgtaccctcca
ggagcacctggccttggccaacagattttctatgggcaagcaccacctatgattcctcca
caaggtggatttggctaccaacagcagcttgtacctggagtgagacctggagctgcccca
atgcccaatttctttgtgccttttatgcagcagggtcagcagggtcagcgcccaggaggt
agacgtggtgctggtcctggacagcaaaatcagcagcctgtcccaatgatgcagcagcag
atgcttccaagggggcgtgtgtatcgttacccaccagggaggaacatgccagaagtccca
atgcctgggactatgcttcctggatatgacatggccggcatgcctatccgtgatactgga
attgctcagcctgtgcccatcactgcattagcaactgccttggctaatgcatctcctgag
caacaaagaacaatgctcggagaaagcttgtaccctctggtggatgccattgagcatgac
aatgctgccaaggtgactggtatgttactagagatggaccagactgaagttctgcatttg
cttgagtctccagatgcattgaaggccaaagttgcggaggctatggaagttctgaggaat
gttgcacaacagcagggtggtaatcctgcagatcagttggcttcattgtcactcaatgac
aacctggtatcttaa
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integrated database retrieval system
