Chenopodium quinoa (quinoa): 110690286
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Entry
110690286 CDS
T05764
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110690286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110690286
Enzymes [BR:
cqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110690286
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110690286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110690286
NCBI-ProteinID:
XP_021722801
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MNQTSESASETVAGVRFGVMTDEEIRKLSVVKITNRNILNLVGRPEPGGLCDPALGPSDD
HSLCKTCGHRAFYCPGHCGHIDFVSLVYHPLLFDMLYRILQNTCLACYHFKAPPEEVEMC
VCKLNLITNGDIVGARELDNSNGYPNDSYKSLGGIFEGLKHRSLTSFQLTEALSVLKSLL
KKRSPKCNRCGAKNPPITKPTFGWFHMGGLNDSNIKANIIKGHRLDGPLAEGDDDNALSE
VENAEDHDDGKLASLKQRKKKDDLQLEFMKWKKSRSLLPTEVRGILERLWENEARFCSFV
CDIQQHQGFTSEKKAAFMMFFLKTLLVPPLKFRPPSKGGELVMEHPRTVLLSKILESNIS
LANAYEQHAEHNFILSRWMNLQQSVNVLFNSKSAAGPGQRELASGICQSLEKKEGLFRQK
MMGKRVNFACRSVISPDPYLAVNEIGIPPVFALKLTYPERVTPWNVTSLREAIVNGPDIH
PGATHYVDKITSKLPPIRKSRIAFARKLPSSRGVTTQPGKSFSNDYEGKVVHRHLRNGDV
VLVNRQPTLHKPSIIALKVRVLPGEKTIRFHYANCDSFNADFDGDEINVHFPQDEISRAE
AYNIVNADNQYIVPTRGDPKRALIQDHIVGAVLLTKRDTFLTLQEFNELLYMSGVCSSGA
SSLNAKSEKKISVVDAENVIQVHPPAIIKPQMLWTGKQVITAILNHVTRGSLPFTAKKRA
KIAREYFGRDESKRKNDENLKTAEEGSQKKKKKSRSSKKMIAGDSAISIQRDPSHSIDED
VVFVYKNELVQGVIDKEQFGKFGLVHTVQEMYGSDAAGTLLSVLSRVLTAFLQLHGFTCG
VDDILLLQPYDILRKKLLDICHNCGEEVHQQFIGREEEGLEFSEMQIEIEKAVRRNGESA
IALLDGLMRSKLNTLSSAVTKLFPEGLIKPFRKNCLSLMTLSGAKGGTFNFQQISLLLGQ
QELEGKRVPRMVSGKTLPCFVPWDCSARAGGFISDRYLTGLRPQEFYFHCMAGREGLVDT
AVKTSRSGYLQRCLIKNLECLSVQYDYTVRDADGSVIQFRYGEDGIDVHKKNYMHEYEAL
ALNQSLIVSTNPLSQIDDGSLSKYIDEDNEVPNQLAKEAKEFYKGHPKDCLNFLKLVKNK
YYMSLAQPGEPVGIIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASKSI
RTPTMTCPLLKCKAKDDAEQLAAMLKRITVADLIENMEVSVVPFAIEKHEICSIYKLKIK
LYDPVLYPPHTDITLKDCHSTLLDEYMSEMEAAIKSHLLLLSRICGIKSESQPKGSADMD
EDGFGSQSQTVEEEDDDDDEDDDDNDCNEAGGDHSSKVRKRKQQDEIEYEDDSEEVEEGN
PVADRENGDEDGDLDEDGEVSEDNDVLKTSSGPDSDEQKDKPEAYQRKKSDNDKAIYVDC
DGLIFEVHFKLSNEPHILLAQIAEKVAKKVYVKTAGKIEQCKVVELHLDDSGMGGIPMLR
KGKESRPALQTAGVDFAAFWDMQDELDVKLISSNDIYAMLSTYGVEAARATIITEIFTVF
GHYGVTVDMRHLTLIADYMTHTGAYRPLSRSGGIIDSISPFSKMSYETASKFLTDAAAHG
EVDTLETPSARICVGLPAKVGTGCFDLMHDLDV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacttccgagtcggcgtcggagacggtggcgggagtgcgtttcggtgttatg
acagatgaagagatacggaagcttagcgtagtcaaaattacgaaccgtaatatattgaat
ttggttggtcggcccgagccgggtggtctgtgtgatcctgctttaggtccatcggatgat
catagtctctgcaaaacttgtggtcatcgtgccttctattgcccaggacattgtggtcat
atagatttcgtgtcattggtttatcaccctttattgttcgatatgctctacagaatactg
cagaatacctgtttggcttgctaccattttaaggcacctccagaggaggttgagatgtgc
gtctgtaaattgaaccttataacaaacggtgatattgttggggccagagagctagataat
tcaaatgggtatcctaatgacagctataaaagccttggtgggatttttgagggccttaag
catcgtagcttgacctcttttcagcttaccgaagcactttcagtcttgaaaagtttattg
aagaaacgaagtcccaaatgtaatcgttgtggtgccaagaatcctcccattactaagcct
acgtttggttggtttcacatgggtggcttaaatgatagcaacataaaagcaaatatcatc
aaagggcataggttggatggacctttggctgaaggagatgatgataatgctttgtctgag
gtagaaaatgctgaggatcatgatgatggaaaattagcatcgcttaaacaaaggaaaaaa
aaagatgacctgcagctagaatttatgaagtggaaaaagtcacgatctcttttaccaaca
gaagttagaggaatattagagcgtctatgggaaaatgaggctcgattttgctcgtttgtt
tgtgatattcagcaacatcaaggatttacgtctgagaagaaagctgcttttatgatgttt
ttcttaaaaactctactagtacctccattgaagtttcgtccgccctctaagggaggggaa
ttagtcatggagcatcctcggacagttttattgagcaagattttggagtctaatatatcc
ttggcaaatgcttatgagcagcatgctgaacataactttattcttagtaggtggatgaat
cttcaacaatctgtaaatgttcttttcaatagcaagagtgcagcaggtcctggacaaaga
gaattggcttctgggatatgtcaatctctggaaaaaaaggagggtttgttccggcagaag
atgatggggaaacgagttaattttgcttgtcgttctgttatatcacctgatccatatcta
gcagtaaatgagattggcattcccccggtttttgcattgaagttgacctaccctgagaga
gtgactccatggaatgtcacaagcttaagagaagcaattgttaatggacctgatattcat
cctggggccacacactatgttgataaaataacatcaaaactaccacctatcaggaaatct
cgtattgcttttgcaagaaaattaccttcttcaagaggagtcacaacccaacctgggaag
tctttcagtaatgattacgaagggaaggttgtacaccgtcacttgcgcaatggggacgta
gttctggtgaatcgacagccgacgcttcataaaccaagtataattgcacttaaggtccga
gtcctgcctggagagaagactattcgttttcattatgcaaactgcgactctttcaatgct
gattttgacggtgatgaaataaacgttcactttccacaagatgagatatctcgggctgaa
gcttacaacattgtcaatgctgataaccaatatatagttcctactcgtggtgatcctaaa
agagccttaattcaggatcacattgtaggtgctgtacttctcacaaagagagatactttt
cttaccttacaagaatttaatgagcttctatatatgtccggtgtgtgttcttctggcgca
tcatccctgaatgccaaatctgaaaagaaaatatctgtagtagatgcagaaaacgtcata
caggttcatccacccgctataattaaaccacagatgctttggacagggaagcaggttata
actgccatcttgaatcacgtaacgagaggttctttaccatttactgcaaaaaagcgtgct
aaaattgctcgagaatattttgggagggatgaatccaaaaggaagaatgatgaaaatctt
aagacagctgaagagggttctcaaaagaaaaagaagaaaagtcggagttctaagaagatg
attgctggagattcggcaataagcattcaaagggaccccagccacagcatcgatgaagat
gttgtgtttgtttacaaaaatgagctggttcaaggggtaattgacaaggaacagtttggg
aagtttggtttagttcatactgtgcaggagatgtacgggtctgatgctgcaggaaccttg
ctttctgtattgagtcgtgttttgacagctttcctgcagttgcatggttttacctgtgga
gttgatgatattctcctactacaaccttatgacatcctgaggaaaaaattgcttgatatt
tgccataattgtggcgaggaggttcaccagcaatttattggccgcgaggaagaaggttta
gaattttcagagatgcaaatcgaaattgaaaaagcagttcggcgtaatggagaatctgca
atagcgcttcttgatgggttgatgagaagtaagcttaatacactgagctctgcggtcact
aagctattccctgaaggactaattaagccttttcggaagaactgtctttctctcatgaca
ctctctggagctaaaggtggcactttcaacttccaacaaatctctcttttgttgggtcaa
caagagttggaagggaaacgtgtgcctcgaatggtttctggaaagacgctaccttgcttt
gtcccttgggactgttcagctcgagctggaggatttatcagtgatcgttatcttactggc
cttcgcccccaagaattttatttccactgcatggctggtcgtgaagggttagtggatact
gccgtcaaaacgtctcgcagcggataccttcaaaggtgcttgattaaaaatcttgagtgc
ctcagcgttcaatacgactacacagttcgtgatgcagatggttctgtaattcagttccgc
tatggagaagatggaatcgatgttcacaagaagaactatatgcatgaatatgaggcatta
gcattgaatcaatcactgattgttagcacaaatcctttaagtcaaatcgatgatggatcc
ttatccaagtacattgatgaagataatgaagtaccaaatcaacttgccaaggaagccaaa
gaattctataaaggtcacccaaaggactgtttgaactttctaaaattggttaagaacaaa
tattacatgagtcttgcacaacctggggagcctgttggaataattgcagctcagtcagtt
ggagaaccatctacacagatgacattgaatacattccatcatgccggtcgaggtgaaatg
aatgtgacactaggaattccacgtctgcaggagatattaatgactgcatcaaaatctatt
aggactccaactatgacatgtcctttgctaaagtgcaaagctaaggatgatgcagagcaa
cttgctgctatgttgaagaggatcacagttgctgacttgatagaaaacatggaagttagt
gttgtgccatttgcaattgagaaacatgaaatctgcagtatatataagcttaaaataaag
ctctatgatcctgtactttatcctcctcacactgatataacattaaaagactgtcacagt
accctgctagacgagtatatgagtgagatggaagctgctataaaaagtcatttgcttttg
ctttctagaatatgtggtatcaaatctgaatcccagccaaaaggttcagcagacatggat
gaagatggttttgggagccagtcacagacagtagaagaagaagatgatgatgatgatgaa
gatgatgatgacaatgattgcaatgaagcagggggagatcattcgtcaaaagtacgaaaa
aggaaacagcaagatgagattgagtatgaggatgactcagaagaagttgaggagggaaat
cctgtagctgatcgtgagaatggagatgaagatggtgatctggatgaagatggagaagta
tctgaggacaatgatgtactgaaaacctcttctggtcctgattctgatgaacaaaaggac
aaaccagaagcttatcaaagaaaaaaatcagataatgacaaagcaatatatgttgactgt
gatggactaatttttgaagtccattttaagttgtcaaatgaaccacacatattgctggcg
cagattgcggagaaggtagctaagaaagtttatgttaagactgctggcaagattgagcaa
tgtaaagtagtggagcttcatttggacgactctgggatgggaggaatcccaatgcttaga
aaaggtaaagaatctcgtcctgctcttcagactgctggtgtggattttgccgctttttgg
gatatgcaagatgagctggatgtcaagctcattagttccaatgacatttatgcaatgctt
agtacttatggggttgaagctgccagagcgaccattataacagagatcttcacagttttt
ggtcactatggagtcacagtagacatgagacacttaaccttaattgcggattacatgaca
catacgggcgcgtataggccattgagcagaagtgggggtataattgattcgatatctccg
tttagcaaaatgtcgtatgaaactgcttccaagttcctaactgatgcagcagcccatggt
gaagttgataccttggagactccttcggctaggatttgtgtgggcttgcctgctaaagtt
ggtacaggatgttttgacttgatgcatgatttggatgtgtag
DBGET
integrated database retrieval system
