Chenopodium quinoa (quinoa): 110690772
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Entry
110690772 CDS
T05764
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110690772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110690772
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110690772
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110690772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
110690772
NCBI-ProteinID:
XP_021723355
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MVRLSFGEKNFIRGGIAQNLRCDGRKRLSVKAELGRPNLSQPDKGKVSIHIDCSATAAPI
FQSQGKGGEALSTELAADLQCCLLDGKSGAGAGIDLSSLSIVEGKVCWDLYIDGLVVSSD
GNMLDTLGAAIKATLSDTGIPKVNVIAADSTSAGDQPEVDVSDEEFLQFNTSAVPVIVTV
TKVGKHYIVDATEEEESQMSSAMSVSINRKGLICGLSKRGGAGVDPSIVLDMISVTKHVS
ENFVNKLDSEIAAAEAPEEES
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggtgagactatcatttggagaaaagaacttcattagaggtggtattgctcaaaatctt
cgttgtgatggtcggaaacgcttatctgtcaaggcagaattagggagacccaatttgtct
caacccgataaaggaaaggtttcaatacacattgattgtagtgctacggctgcacctatc
tttcagtcacagggcaaagggggtgaggcattatcaacagaacttgctgctgatcttcag
tgttgcctcttggatggtaaaagtggagcaggagctggaattgacctttcatccctatct
attgtggaagggaaggtttgttgggatctttatattgatggccttgtggttagttcagat
gggaatatgctggataccttaggtgctgcaatcaaggctactttaagtgataccggcatt
ccaaaagttaatgtcattgctgctgattcaacatctgctggtgatcaacctgaagttgat
gttagcgatgaagaatttttacagtttaacacttctgcagtacctgtgattgttacagta
accaaggtaggaaaacattacatagtagatgcaacagaagaggaggaatctcaaatgagt
tccgcaatgtctgtctctatcaataggaaaggccttatatgtggtctttccaagcgtggg
ggtgcaggtgtagatccaagtatagtccttgatatgatctcagtaacaaaacacgtgagc
gagaattttgttaacaaattagactctgagatagctgctgcagaagctcctgaggaagaa
tcatga
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