Chenopodium quinoa (quinoa): 110691170
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Entry
110691170 CDS
T05764
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110691170
09123 Folding, sorting and degradation
03018 RNA degradation
110691170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110691170
03041 Spliceosome [BR:
cqi03041
]
110691170
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110691170
mRNA cycle factors
Stress granule specific factors
110691170
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110691170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
RRM_3
RRM_7
MARF1_RRM1
Motif
Other DBs
NCBI-GeneID:
110691170
NCBI-ProteinID:
XP_021723780
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAQVQAPASVSAPIAGAPNGVANPNGGAAVGGAGAAAFVTTSLYVGDLDFTVNDSQLYDL
FNQIGQVISVRVCRDLSTRRSLGYGYVNFSNPQDAARALDVLNFTPLNGKPIRVMYSHRD
PSIRKSGSGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDSNGQSKGFGFVQFDLEE
AAQKAIEKLNGMLINDKQVYVGHFVRKQERDSNLGGTRFNNVYVKNLGEVTADDDLKKVF
GEYGPITSAVVMRDADGKSKGFGFVNFDNAEDAANAVEALNGKKFDDKEWYVGKAQKKSE
REQELKGKFEQTMKEAADKYQGANLYIKNLDDTVDDEKLKEMFAEFGKITSCKVMRDPSG
ISKGSGFVAFSNPEEASRALSEMNGKIIVSKPLYVALAQRKEERRARLQAQFSQMRPIAM
APSVGPRMPMYPPGAPGLGQQIFYGQAPPMIPPQGGFGYQQQLVPGVRPGAAPMPNFFVP
FMQQGQQGQRPGGRRGAGPGQQNQQPVPMMQQQMLPRGRVYRYPPGRNMPEVPMPGTMLP
GYDMAGMPIRDTGIAQPVPITALATALANASPEQQRTMLGESLYPLVDAIEHDNAAKVTG
MLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQQGGNAADQLASLSLNDNLVS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagttcaggctccggcttcggtttcggctccaattgcgggtgctcctaatgga
gtggcgaaccctaatggcggcgctgccgttggtggtgctggtgctgcagcgtttgttacg
acgtcgctttacgtcggtgacctcgacttcactgtcaatgactcgcagctttacgatctg
tttaaccagattggtcaggttatttctgttagggtttgcagggatttgtctactcgccga
tctcttggatatggttatgtcaacttcagcaaccctcaagatgctgcgcgggcattggat
gtgttgaacttcactcctctaaatggaaagcctattagagttatgtactctcatcgagac
cctagtattcgtaaaagtgggtctggtaatatctttatcaagaatttggacaaatccatt
gaccacaaagctttgcatgacacattttcttcctttggaaacatcctgtcatgcaagata
gctactgattctaatggtcagtctaagggatttgggtttgttcagtttgatcttgaagaa
gctgctcaaaaagctatagagaagctaaacgggatgctgatcaatgataaacaagtatat
gttgggcactttgttcgtaagcaggaaagagattccaatttgggtggaacaagattcaac
aatgtctatgtgaaaaatttgggtgaagtaactgccgatgacgacttgaaaaaagtattt
ggtgaatatggacctataaccagtgctgttgtgatgagggatgcagatgggaaatcaaaa
gggtttggatttgtgaactttgataatgctgaagatgctgccaatgcagttgaggcatta
aatggtaagaaatttgatgacaaagagtggtatgtggggaaggcacagaagaaatctgaa
agggagcaggagcttaaaggaaagtttgagcagaccatgaaggaagctgctgacaagtac
cagggtgccaatttgtacatcaagaatttggatgatactgttgatgatgagaagcttaag
gagatgtttgcagagtttggaaaaattacatcttgcaaggttatgcgtgatcctagcgga
ataagtaagggatctggctttgtggcattttcaaaccctgaagaggcatcccgagctctt
tccgagatgaatggaaaaattattgtcagcaagcctttgtatgttgcccttgcacagcgt
aaagaagaaagaagagctcgcttgcaggctcagttttcgcaaatgaggccaatagctatg
gcaccttctgttggtcctcgcatgccgatgtaccctcctggggcacctggccttggccaa
cagattttctatgggcaagcaccacctatgattcctccacaaggtggatttggctatcaa
cagcagcttgtacctggagtgagacctggagctgccccaatgcccaatttctttgtgcct
tttatgcagcagggtcagcagggtcagcgcccaggaggtagacggggggcaggtcctgga
cagcaaaatcagcagcctgtcccaatgatgcagcagcagatgcttccaagggggcgtgtc
tatcgctacccacctgggaggaacatgccagaagtcccgatgcctgggactatgcttcct
ggatatgacatggccggcatgcctatccgtgatactggaattgctcagcctgtgcccatc
actgcattagcaactgccttggccaacgcatctcctgagcaacaaagaacaatgcttgga
gaaagcttgtaccctctggtggatgccatcgagcatgacaatgctgccaaggtgactggt
atgctactagagatggaccagactgaagttctgcatttgcttgagtctccagatgcattg
aaggctaaagttgcggaggctatggaagtactgaggaatgttgcacaacagcagggtgga
aatgctgctgatcagttggcttcattgtcactcaatgacaacctggtatcttaa
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