Chenopodium quinoa (quinoa): 110691576
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Entry
110691576 CDS
T05764
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110691576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110691576
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110691576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_EIPR1
PRP4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SCAP
WD40_like
eIF2A
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
110691576
NCBI-ProteinID:
XP_021724210
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MEVDEENPSSASVAEPTPPGTDTEMLATSEPATDIMGPATLTSPMITPPAVPLSAPSAVA
PLSAPPPVLVPSIAPLPPATSRPLAPLPARPSLTQNGEAKESDSEDDDQGSEMDAQDSSV
GYEITEESRAVRERQEKAMKEFMMKRRAAALAVPTNDVAVRTRLRRLGEPITLFGEREME
RRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVDEEMFQYPFYTEGTQELLEARK
FIAKFSIVRASQHLQRARRKRDDPDEDEDAEVDWALRQAETFVLDSSEIGDDRPLGGCSF
SKDGNFLATCSSSGVAKIWSMPEVKRVSALKGHTVHATDVAFSPVSDIVATASADRTAKL
WNTDGTLVRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSRSV
YGIAFHLDGSLVASCGLDSLTRVWDLRTGRSVLALEGHIKPVYGADFSPNGYHLATGSED
NTCRIWDLRKKKSLYIIPAHSKLISEVKFEPQEGYYLVTSSYDTTVKVWSSRDFKLIKTL
SGCESRVTSVDITGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagatgaagagaatccttcttctgcttcagttgctgaaccaactcctccagga
actgatactgagatgctggctacttctgaaccagctactgatatcatgggtcctgctact
cttacatcccctatgattacaccgcctgctgtcccgctatcagctccttctgcagtcgcc
cctttgtcagctccacctccggtgctggtcccatcaatcgcgcctcttcctcctgcaaca
tctagaccattagcccctctccctgcccgtccttcccttactcaaaatggtgaggcaaag
gaatcggattctgaggatgatgaccagggttcagaaatggatgcgcaagattcctctgtt
gggtatgaaattacagaggagagtcgggctgttagggaacgtcaggagaaagcgatgaag
gaattcatgatgaaaagacgcgctgctgctttagctgtccccacaaatgacgtagctgtg
cggactaggcttcggcggcttggtgaacccattactctctttggggagagagagatggaa
agaagggaccggctgcggatgcttatggctaagcttgatgctgaagggcaattggaaaag
cttatgaaagcccatgaagaagaggaagaagcagcttcagctaaggatgaggtcgatgaa
gaaatgtttcagtacccattttatacagaggggacccaagaattgttggaggctcggaag
tttatagcgaagttctctattgttcgagcatctcagcatctgcagcgtgcaagaaggaaa
agagatgatccagatgaagatgaagatgctgaagttgattgggctcttagacaggcagag
acttttgttcttgattctagtgagattggtgatgaccgcccactcgggggttgttcgttt
tcaaaagatgggaattttcttgctacctgttcttctagtggagttgctaagatatggagt
atgcctgaagtgaagagggtctctgccttgaagggacacactgtgcatgctactgatgtt
gcattttctcctgtaagtgacattgtagcaactgcctctgctgatcgtactgcaaagttg
tggaatacagatggtacattagtgagaacatttgaaggtcatttagatcgcttagctcgt
attgccttccatccatccggaaagtacttgggcaccacaagttttgacaaaacttggcgt
ctatgggatattgaaagtggtgcagagttgcttcttcaagaaggccatagcaggagtgtt
tatggcatagcttttcatctagatggatccttggtagcatcctgtggactggattctctc
acacgtgtctgggatcttcgaacaggaagaagtgttctcgctttggaaggacacatcaaa
cctgtctatggggctgatttttctcctaatggctatcatttggccaccggctccgaagat
aatacctgccgaatctgggatttgagaaagaaaaagtccttgtacataatccccgcccat
tctaagcttatttcagaggtcaaatttgagccccaagagggatattacttggtcacttct
tcatacgatacaactgttaaggtatggtcatctcgagacttcaagcttatcaagacttta
tccggatgtgaatcaagagtcacatccgtagatattacaggagatggacaatgcattgct
acagttggacatgatcgaacaattaagctctggtcaagcagtgtcccctctgaagaaaag
tcgatggacctaggctaa
DBGET
integrated database retrieval system
