Chenopodium quinoa (quinoa): 110691950
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Entry
110691950 CDS
T05764
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03022
Basal transcription factors
cqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110691950
09124 Replication and repair
03420 Nucleotide excision repair
110691950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110691950
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110691950
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110691950
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110691950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GRAM
DUF1664
Motif
Other DBs
NCBI-GeneID:
110691950
NCBI-ProteinID:
XP_021724624
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MGSGGEMLVKRAKYKVSPKAPGNPGVLKMTMDEFVFAPNDPTSGTKLRVRFNSIKAHRVT
KEGSSKQALLNLLKKGEGSEGYIFEFENFSDRDMCRDFVTKALEKHPDVPKKDSEGPAQL
SSEEMERRIKLLQEDSELMKLHKQLVIGKILTEDEFWATRKKLLDSGNKRSSSTQRVGFK
SAMISDIKPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHQAFLTYVPKRMSEKDFWTKYCR
AEYLHSTKNAIAAAAEAAEDEQLAVFLKQDYILASEARRKIRKVDPTLDMEADQGDDYTH
LPDHGNHRDGNKEVAESQTHYDQYKRNLSQDLNRHAAVVLEGRALDVVIGDTRIVAEALA
RMKKVELANDTSEMNDNQERLNRVCRMTEIEDLQAPHEPPVAPLCIKDPRDYFFSQQANA
LNSLGDTAVGARHVNCHINTQEAYTCLRESISDIKSVGLQTSIIKAEVAFKVLASLTHSI
SSTKYNLGGNNRETVLDRLPSRTKEDLLNHWTSIQELLKHFWSSYPITTEHLSVKVDRLK
DAMAQIYPKLQQIKESVPSDLRHQISLLVQPMVQALDAAFAHYDANLQKRRAKSGLNGTI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggtctggtggtgagatgttggtgaagcgtgcaaagtataaagtttctccgaaggcc
cccggaaaccctggtgttttgaagatgactatggatgagtttgtttttgctcccaatgat
cccacttctggaacgaagcttcgagttcgtttcaattccattaaagctcacagagtcacc
aaagaaggatcaagtaaacaggcattacttaatctgctgaagaagggtgaaggatcagaa
gggtatatatttgaatttgagaacttcagtgatagagatatgtgtcgggattttgtgacc
aaggcccttgagaagcacccagatgttcccaaaaaggattctgaaggacctgctcaatta
agttcagaagaaatggagcgacgaataaaacttttgcaagaagacagtgagcttatgaaa
ctacataaacagttggtaattggtaaaattttgacagaggatgagttctgggcaactaga
aagaaattgttagatagtggaaataaaagatcatcttcaacccagcgagtgggatttaaa
agtgctatgatatcagacatcaagccactgactgatggtcggacaaataaagttaccttt
aacttgacaccagaaatcattcatcagatttttgctgagaagccagcagttcatcaggct
tttctgacttatgtgccaaaaaggatgtccgagaaagacttttggaccaaatactgcaga
gcagaatatcttcacagcaccaagaatgccatagctgctgcagcagaagctgctgaagat
gagcagcttgctgtttttctaaagcaggattatatactagcaagtgaagctcgtagaaag
ataagaaaggttgatccgacgttggacatggaagctgatcaaggggatgattacactcac
cttccggatcatggtaatcaccgagatggaaataaagaagttgcagagtcccagacacat
tatgaccaatacaagaggaacttgtcgcaagatctcaatcgacatgctgctgttgttctt
gagggaagggctctagatgtggtgattggggacactcgaattgtagcggaggcacttgct
cggatgaaaaaagtagaattggccaatgatacatccgaaatgaacgataaccaagagcga
ctgaatagagtttgtagaatgacagaaattgaggatctgcaagcacctcatgaaccccct
gtggctccgctttgcatcaaggaccctagagattatttcttttcacaacaagccaatgca
ctgaattccctgggagacactgctgttggagctagacatgtgaattgccacattaacacg
caggaagcttatacttgtttgagggaatccatatctgatatcaagtccgtgggacttcag
acatcaatcattaaagctgaagttgcttttaaggttttggcaagtttgacccatagtata
tctagtacgaagtataatcttgggggaaataatcgggaaactgttctggatagattaccc
agcaggacgaaggaagatttgttaaatcattggacatccattcaggagttgctaaagcac
ttctggtcatcatatccaattacaacagaacatctttctgtaaaggttgatagattgaaa
gacgcgatggctcagatatatccaaagctacagcaaattaaggagtctgtgccatcagat
ctcagacatcaaatctcgcttctggttcagccaatggtccaggctttggatgccgctttt
gcgcattatgatgcaaacttgcaaaagaggagggcaaagagtggattaaatggtaccatc
taa
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