KEGG   Chenopodium quinoa (quinoa): 110693645
Entry
110693645         CDS       T05764                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110693645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cqi04121]
    110693645
   03036 Chromosome and associated proteins [BR:cqi03036]
    110693645
Enzymes [BR:cqi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110693645
Ubiquitin system [BR:cqi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110693645
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     110693645
    Noncanonical PRC1 (PRC1.1)
     110693645
    Noncanonical PRC1 (PRC1.3/1.5)
     110693645
    Noncanonical PRC1 (PRC1.6)
     110693645
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-UDP zf-Nse TRAF3_RING zf-RING_6 zf-RING_11
Other DBs
NCBI-GeneID: 110693645
NCBI-ProteinID: XP_021726485
LinkDB
Position
Unknown
AA seq 454 aa
MPAQKRSAEDNYSDEDPPNNAAGDVPENQPDEQRDVAANDDDDEAPHEEEQDGDEEGEDD
EDDDDDDAEDDEGDKHGGGRVTDRTPSFITNGNVNKEGLILIKLSDIRKEVQCPICLGII
RKTRTVMECLHRFCRECIDKSMRMGNNECPACRKHCASRRSLRDDPNYDALIAALYPDID
RYEEEELAFQEDERVRNKQIQAAIAQTFRRQSEALGRKRKRSQSNHRKRRNYRSDDDDDA
NGHDGGKDSSSADERCTESKSKRSKRWRGQPSPAAASGDGGGDENEQEVVHRDAGVSPAA
FVGTSEILAWGRGGLRSSTRYGSGNGGNVKHSRGRFVKLTDYFRTWEQNESELDIQVVLV
SLDEQKELLLEHSYLCGRPALSVGQICEFISHQTSLPSDKVEILGAKGSSLSSTAFEACK
DELQVLNSEETLAGLKASSNFTQGHLMLAYRKKL
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgccagcgcagaaacgttcggcggaggataactactccgacgaggatcctcccaacaac
gccgccggagatgtcccggagaaccagcctgatgagcaacgcgatgttgctgcgaatgat
gatgatgatgaagcaccacatgaggaggaacaagatggagatgaagaaggcgaagacgac
gaagatgatgatgatgatgatgcggaagatgatgaaggtgataaacatggcggcggaaga
gtgaccgatcgaactccgtcgtttatcactaatggtaacgtcaataaggaaggattaatt
ttaattaaactgtcagatattcgcaaggaagtacaatgtccaatatgtcttgggatcatc
cgtaagacaagaacagttatggaatgtctgcatcgcttctgcagagaatgcattgacaaa
tcaatgcggatggggaacaatgaatgccctgcttgccgcaagcactgtgctagtcggcgg
tccttaagagatgatccaaattatgatgcactgattgctgcattatatcctgatattgat
cgatatgaagaagaggagctggcttttcaggaagatgaaagagttcgaaacaagcagatc
caagctgcaattgcacaaactttccgccgacagagtgaagcacttggccggaaaaggaaa
agatcacagagtaatcatcgaaaaagaagaaactataggtctgacgatgatgatgatgcc
aatggtcatgatggcggtaaagattcatcttctgcagatgaacgttgcacagagtctaaa
tctaaaagatcaaagcggtggagaggtcagccatcgccagcagccgctagcggagatgga
ggtggtgatgaaaatgaacaggaggtggtccacagggatgctggggtttcaccagcagca
tttgttggaacctcagaaattcttgcctggggtagaggtggcttacggagcagtactaga
tatgggagtggcaatggtggcaatgtcaagcactctcgtggtcgttttgtgaagttgact
gattattttcggacatgggagcagaatgaaagtgagttggatattcaagtagtgcttgtt
tctctcgacgagcagaaagaacttcttcttgagcactcctacttgtgtggcaggccagcc
ttatctgtggggcaaatatgcgaatttatttctcatcagacctcgttgccatctgataaa
gttgaaattttgggagcaaaaggaagctctttaagttcgactgcatttgaggcatgcaaa
gatgagttgcaagtgttgaattctgaagaaacccttgctggacttaaagcttcaagcaat
ttcactcaaggccacttgatgttggcatatcggaaaaagctgtga

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