Chenopodium quinoa (quinoa): 110694132
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Entry
110694132 CDS
T05764
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110694132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110694132
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110694132
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
FtsL_2
Motif
Other DBs
NCBI-GeneID:
110694132
NCBI-ProteinID:
XP_021726991
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MATLADSFLADLDDLSDNEADVVVEGDADADNMEEDIDGELADIESLNYDDLDSVSKLQK
SQRYTDIMQKVEDALLKGSEIPEHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTVEACDRAIELDSARKKVLDFVESRMVYIAPNLSAIVGSAVAAKLMGTAGGL
ASLAKMPACNVQLLGAKRKNLAGFSTATSHFRVGYIEQTEVFQSTPPPLRMRACRLLAAK
STLAARVDSTRGDSTGKTGRTLREDIRKKIEKWQEPPPPKIPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRMSAGPSKLAA
KVAKKFKEKRYGSSGVTSGLTSSLAFTPVQGIELSNPQAHAHQFGSGTQSTYFSETGTFS
KIKSNLSRI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcttggccgatctggatgatttatcagacaatgaagct
gatgtcgtggtggaaggagatgctgatgctgacaacatggaggaggatatagacggagag
ttagctgacatagaatctctgaattatgatgaccttgatagcgtttccaaactacaaaaa
tctcaacgttacactgatataatgcagaaagttgaagatgcattgctaaaaggttcagag
attcctgaacatggaatagttttggaagatgatcccgaatatcagctgattgttgactgc
aatgctttgtcagtggatattgagaatgagattattattatccataattttatccgtgac
aagtaccgtctaaagtttcctgagcttgaatccctcgttcatcaccccattgactatgca
cgtgttgtgaagaagattggtaatgaagtggacttgaccctagttgatctggaagggctg
ctgccttctgccatcattatggttgtttcagtcactgcttcaaccaccagtggtaagcca
cttccagaggatgttttacagaagactgttgaggcatgtgatcgtgcaattgagcttgat
tcagcaaggaaaaaagtccttgattttgttgaaagcagaatggtatatatagcacctaat
ctttcagctattgttgggagtgctgttgcagcaaaactaatggggactgctggaggtttg
gcctcattagctaagatgccagcttgtaatgttcagcttcttggggccaaaaggaagaat
ttggcaggcttttcgactgcaacatctcactttcgtgttggctatattgagcagacagag
gtatttcagagtacgccccctcctttgagaatgcgtgcatgtcgtcttttggctgcaaag
tcaacccttgcagctcgagtagattcaacgagaggagattcaactggcaagactggaagg
acattacgagaagatatccgtaaaaagatcgagaagtggcaagaacctccacctcctaag
atcccaaaacctcttcccgtgcctgattcagaacctaaaaagaaaagaggtgggcgaagg
ctaaggaagatgaaggaaagatatgctgtcacagatatgaggaaattggctaacagaatg
cagtttggtgtgcctgaagagagttctctaggtgatggtttgggagaaggatatggtatg
cttggtcaagctggaagtgggaagttacgtatgtctgctggtccaagcaagcttgcagca
aaagttgctaagaaattcaaggaaaagcgctacggaagcagtggtgttacctcagggttg
acttcaagtttggcatttacccctgtgcagggcattgaactttcaaatcctcaggctcat
gcacatcaatttggtagtggaactcagagtacatatttttctgaaacaggcacattttca
aaaatcaagagtaacttgagtagaatatga
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