Chenopodium quinoa (quinoa): 110694474
Help
Entry
110694474 CDS
T05764
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110694474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110694474
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110694474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_VPS8
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_LRRK2
VPS8_N
WD40_like
TAF1C_beta-prop
Beta-prop_IP5PC_F
WDCP
Motif
Other DBs
NCBI-GeneID:
110694474
NCBI-ProteinID:
XP_021727342
UniProt:
A0A803LJT1
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MKSDLRDGPAALSQGIFEPLRAIGYITCSVPFSVQRLGTETFVTVSVGKAWQIYNCAKLN
LVLVGPQLPKKIRALASYRDYTFAAYGNEIAVFKRAHQVATWSSHTAKVQLLYLFGDHIL
SVDVDHHLFIWAFKGIEQNLEPLSHIVLEGNFSPTCIVHPDTYLNKIIFGSQEGNLQIWN
VNTKKKLYDFKGWDSPISCCVSSPALDVVAVGCADGKIHVHNIRYDEELVTFTHSMRGAV
TALSFSTDGQPLLASGGSSGVISIWNLEKRRLQSVIKDAHDGAIISLHFFANEPVLMSAS
ADNSIKMWIFDTSDGDPRLLRLRNGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVVQDQ
QSRELSQRHVAKRAKKLRIKEEDIKLKPVVAFDCAEIRERDWCNVVTCHVDTSEAYVWRL
QNFVLGEHILNPSEENRTPVKACTISACGNFAVLGTAGGWIERFNLQSGLSRGSYLDKSE
RRSCGHYGEVVGVACDSTNTLMISAGYHGDIKVWNFRGRELNSRWEVGCPVVKIVYHRPN
GLLATVADDLVIRIYDVVALRMVRKFEGHNDRVTDLCFSEDGKWLLSSSMDGTLRIWDVI
LARQIDAVRVDVAITALSLSPNMDVLATTHVDQNGVYLWVNQAMFTGSSSIDSYASGNDI
RHVNLPSVSAAEGNKVTDFEKRDTDYLHVKETGIIQFDQKIPDLITLSLLPKTQWQSLIN
LDIIKVRNKPIEPPKKPEKAPFFLPSVPSLSGDIMFKPSEETNEELKDGDAEKNSDYMTN
ILASPFLQVLQSAVESKNFSAFTDYIKGLSPSSLDMELRMIQIIDDDDESSGLSKRPEML
SLDMLLDYFIYEISCRNNFEFVQAVVRLFLKIHGETVRCQSQLQEKAQKLLETQCAVWQR
VDKLFQNARCMVAFLGNSQF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagacctcagagacgggcctgctgccctttctcaaggaatttttgaacccttg
agagcaattggctacatcacttgctctgttcctttctctgttcaaaggcttggcactgaa
actttcgtcactgttagcgtcggaaaagcttggcaaatttacaactgtgctaagcttaat
ttggtcctagttggtcctcaacttccaaagaaaatccgggctcttgcttcctaccgtgat
tatacttttgcagcttatgggaatgaaattgcagtgtttaagcgtgctcatcaggttgca
acttggagctctcatacggcaaaggtccaattattgtatctgtttggtgatcacatcttg
agtgttgatgttgatcatcatttgtttatatgggcctttaaaggaattgagcaaaattta
gagccacttagccatattgttttggaaggaaatttttctcctacttgtattgttcatccc
gatacttacttgaataagattatttttggtagccaagaaggaaatttgcagatttggaat
gttaacactaagaaaaagctttatgattttaagggatgggattctcccatatcttgttgt
gtctcatctccagcactagatgttgttgctgtgggttgtgctgatgggaagatccatgtc
cataatatacgttatgacgaagagcttgtcacattcacacattctatgcgaggtgctgtg
actgcactatcttttagcacagatggacagcctcttttagcttctggaggctcttctggt
gtcattagcatatggaatcttgagaaaagaaggcttcagtcagttataaaagatgctcat
gacggtgcaattatttcactccacttctttgcaaatgagcctgtgctgatgagtgcttca
gctgacaactcgataaaaatgtggatattcgatactagcgatggggatcctcgtctttta
cgattacgaaatggacatagtgcacctccactttgtataaggttttatgcaaatgggagg
cacattttatctgctggccaggaccgagctttcaggcttttttctgtagtccaggatcaa
caaagtagggagctttcacagcgtcatgtggctaaaagagccaagaaactcaggataaag
gaggaggatataaagctgaagcctgttgttgcatttgattgtgctgaaattagggagcgt
gattggtgcaatgtggttacttgtcatgtggacacatctgaggcatatgtgtggagactg
cagaattttgtgcttggagagcacatactgaatccttctgaagaaaatcgtactccagtc
aaggcttgcactatcagtgcatgtggaaactttgctgttcttgggacagcaggtggttgg
attgagcgatttaatctccaatctgggctgagccgaggtagttacttggataagtctgaa
agaaggagctgtggccattatggagaagttgttggagtagcctgtgattcaacaaataca
ttgatgataagtgcaggatatcatggtgatataaaggtatggaatttcaggggacgtgag
ctgaactccagatgggaagtgggatgtcccgtggtgaagatagtgtatcatagacccaac
gggttgttagctactgttgctgatgatctagtgatccgtatatatgatgttgtggctcta
aggatggtccggaaatttgaaggccataatgaccgtgttactgatttgtgctttagtgag
gatgggaaatggcttttatcgtctagcatggatggaacacttagaatttgggatgttatt
ctagctagacaaatagacgcagttcgggttgatgtggctatcacggcactgtctttgtca
cccaatatggatgttctagcaactactcatgttgatcaaaatggagtctacctgtgggtg
aatcaggcaatgttcacaggttcatctagtattgattcttatgctagtgggaatgacatt
cgacacgtcaatttgccatctgttagtgcagctgagggaaataaagtgactgattttgag
aaaagagatacagactatttacatgttaaagagactggcataatacaattcgatcagaaa
attcctgatttgattacactttcgctcttgcctaagacccagtggcaaagcctgatcaat
ctggacattataaaggttcgaaataagcccattgaacctcctaagaagcctgaaaaagca
ccattctttttaccttcagttccatctctttcaggagacataatgtttaagcctagtgag
gagacaaatgaagagttaaaggatggagatgctgagaaaaattctgattatatgactaat
atactagcatcgccatttttgcaagtgcttcagtctgcagtagaatccaaaaatttttca
gcattcaccgattatattaaaggtctgtctccatcttctttggacatggagcttcggatg
attcaaattatagatgatgatgatgagtcctcagggctcagtaaaagaccagaaatgctc
tcacttgacatgcttttggattacttcatttacgaaatatcttgcagaaacaactttgag
tttgtgcaggcagttgtgagattgtttctaaagattcatggggaaacagtgagatgtcag
tcacaactacaggagaaagcacaaaagctgttagaaactcagtgtgcagtgtggcagcga
gtagataaattgtttcagaatgctcgatgtatggttgcattccttggcaattcacagttt
tga
DBGET
integrated database retrieval system
